Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03922 ATGGGTTTCTATAGCAGTGGCAGTGAAAAGAGCGAAGCCTATGACGCGCAAATCCATTTGTACAAACATGTGTACAACTTTGTGAGCTCGATGGCTCTGAAGTCTGCTATGGAATTAGGCATAGCAGATGTTATGGACAGGCAGGGCAAACCCATGACCCTTGGTGAGTTGTCCTCTGCTCTCAAACTGCATCCTTCAAAAGTTAGTGTGCTTCACCGTTTCCTGCGCCTTCTAACTCACAACGGCTTCTTCACTAAAACAACTCAGAAGGGTAAAGAAGGAGGAGAAGAAACAGTCTATGATCTTACTCCTCCTTCGAAGCTTCTTATAAGAAGCAAGACAACATGTTTGGCACCTATTGTTAAGGGAGCGCTTCACTCAAGCTCCCTTGACATGTGGCACTCTTCTAACAAGTGGTTCACTGAGGATAAGGAACTCACACTTTATGAGAGTGCATCTGGGGAGAGTTTCTGGGACTTTCTCAACAAAGCCTCTGAACCTGACACACTTACCATGTTTCATGATGCCATGGCTGCAGATTCTCAAATGTTCAAACTTGAACTCAAAGAATGCAAACATGTGTTTGAGGGATTGGGTTCCCTTGTCGATGTCGGAGGTGGGACTGGTGTAATCGGTAGGCTCCTCACTGAAGCCTTCCCTCACTTGAAATGCACTGTTTTTGACCTACCACACGTTGTGGCTAACCTCAATGGAACTGAAAATTTGAACTTTGTTGGTGGAGACATGTTCAAGTCCATCCCCTCTGCTGATGCAGTTCTACTCAAGTGGGTTCTGCATGATTGGAACGATGACCTCTCCGTGAAGATATTGAAGAATTGTAAAGAAGCTATTTCAGGAAAAGGAAAAGAAGGAAAGGTGATAATCATAGAAATAGCAATTGACGAAACAAGTGATGATAGGGAATTGACAGAGTTGAAACTAGACTATGACTTGGTGATGTTAACTATGTTCAATGGAAAAGAAAGAGAAAAGAAAGAGTGGGAGAAACTAATATACCAAGCAGGCTTCAGCAGTTACAAGATTACACCTATATGTGGCTTTAAATCTCTCATTGAACTTTTTCCTTAATTTATTAAAAGCTATTGCAAATAATGAACGCTAAGTTTGAATTTATTATTGCATCTTCCTTTACTTTATAATTTTAGTACATTACATAGTATTTTAAGGATTTTTCAGATAG 1201 0.4088 MGFYSSGSEKSEAYDAQIHLYKHVYNFVSSMALKSAMELGIADVMDRQGKPMTLGELSSALKLHPSKVSVLHRFLRLLTHNGFFTKTTQKGKEGGEETVYDLTPPSKLLIRSKTTCLAPIVKGALHSSSLDMWHSSNKWFTEDKELTLYESASGESFWDFLNKASEPDTLTMFHDAMAADSQMFKLELKECKHVFEGLGSLVDVGGGTGVIGRLLTEAFPHLKCTVFDLPHVVANLNGTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDDLSVKILKNCKEAISGKGKEGKVIIIEIAIDETSDDRELTELKLDYDLVMLTMFNGKEREKKEWEKLIYQAGFSSYKITPICGFKSLIELFP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03922 362 Gene3D Vaccinia Virus protein VP39 111 362 IPR029063 -
Pste3g03922 362 CDD AdoMet_MTases 201 300 - -
Pste3g03922 362 PIRSF O-mtase 4 362 IPR016461 GO:0008168
Pste3g03922 362 PANTHER O-METHYLTRANSFERASE 16 347 IPR016461 GO:0008168
Pste3g03922 362 Pfam O-methyltransferase domain 133 344 IPR001077 GO:0008171
Pste3g03922 362 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pste3g03922 362 Gene3D - 4 109 IPR036388 -
Pste3g03922 362 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Pste3g03922 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 362 IPR016461 GO:0008168
Pste3g03922 362 FunFam O-methyltransferase ZRP4 112 362 - -
Pste3g03922 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 359 IPR029063 -
Pste3g03922 362 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03922 Pste-Chr3 32610253 32612929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03922 28 361 Monolignol Biosynthesis Gene Families AT5G54160 34.125 1.91e-53 179