Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03921 AAAATGGATCTCAATAGCAATGGCACTGAAGAGAGTGAATTGCATCACACTCAAATCCTTTTGTACAAGCATGTGTACAACTGTGTAAGCAGCATGGCTCTGAAATCTGCAACGGAGCTAGGTATAGCAGACGCGATTCACAAGCATGGAAAACCCATGATTCTTTCCGAGTTGGCCTTAGTTCTAAAACTACACCCTTCAAAAGCTGGTGCTCTTCATCGCTTCATGCGTATTCTAACACACAATGGCTTCTTCACCAAAACAACACATACGGGTAAAGAAGGAGAAGAAGAAACAGCGTATGCTCTCACTCCTCTTTCAAAGCTTCTAATCAAAAGCAGCCCAATATGTTGTTTAGCACCTATTTGGTTCACTGAGGATGATGAACTCACACTGTTTGAGAGTGCAAACGGGGAAAGCTTTTGGGACTTTCTCAACAAAACCACCGAATCTGATCAACTTACCAATTTTCAAGATGCAGTAGCAGCTGATTCTCAAATGATGAAGCTAGGACTCAAAGGATGCAAACATGTGTTTGAAGGACTAGATTCTCTTGTTGATGTTGGAGGTGGGACTGGTGGTGCCTCAAGGCTAATTAGTGAAGCCTTCCCTCACTTGAAATGCACTGTGCTTGACCAACCACAAGTTGTGGCTAACTTGGTTGGAACCCAAAATCTGAATTTTGTTGCTGGAGATATGTTCAAGTCCATCCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTTTGCATGATTGGAATGATGAACTCTCTCTCAAGATATTGAAGAACAGCAAAGAAGCTATTTCTGGCAAAGGGAAAGGTGGAAAGGTGATAATCATAGACATAGCAATTGATGAAGCCGTTGATGATCACGAATTGACTAAATTGAAGTTGGAGTTTGACTTGTTGATGTGGGCTTTCTTCAATGGAAAAGAAAGAAAAAAGAAAGAATGGGAGAAACTTATATACGATGCTGGCTTCAGCAGTTACAAGATTACGCCTGTGTTCGGTTTCAAATCACTCATCTAA 1029 0.414 KMDLNSNGTEESELHHTQILLYKHVYNCVSSMALKSATELGIADAIHKHGKPMILSELALVLKLHPSKAGALHRFMRILTHNGFFTKTTHTGKEGEEETAYALTPLSKLLIKSSPICCLAPIWFTEDDELTLFESANGESFWDFLNKTTESDQLTNFQDAVAADSQMMKLGLKGCKHVFEGLDSLVDVGGGTGGASRLISEAFPHLKCTVLDQPQVVANLVGTQNLNFVAGDMFKSIPSADAVLLKWVLHDWNDELSLKILKNSKEAISGKGKGGKVIIIDIAIDEAVDDHELTKLKLEFDLLMWAFFNGKERKKKEWEKLIYDAGFSSYKITPVFGFKSLI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03921 342 Gene3D Vaccinia Virus protein VP39 115 342 IPR029063 -
Pste3g03921 342 Gene3D - 3 110 IPR036388 -
Pste3g03921 342 PIRSF O-mtase 1 342 IPR016461 GO:0008168
Pste3g03921 342 SUPERFAMILY "Winged helix" DNA-binding domain 11 114 IPR036390 -
Pste3g03921 342 PANTHER O-METHYLTRANSFERASE 21 331 IPR016461 GO:0008168
Pste3g03921 342 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 342 IPR016461 GO:0008168
Pste3g03921 342 Pfam O-methyltransferase domain 128 328 IPR001077 GO:0008171
Pste3g03921 342 FunFam Coniferyl alcohol 9-O-methyltransferase 5 110 - -
Pste3g03921 342 FunFam O-methyltransferase ZRP4 99 342 - -
Pste3g03921 342 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Pste3g03921 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 341 IPR029063 -
Pste3g03921 342 CDD AdoMet_MTases 185 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03921 Pste-Chr3 32592648 32594880 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03921 29 333 Monolignol Biosynthesis Gene Families AT5G54160 32.407 2.14e-41 146