Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03920 ATGGATTTCAGTTACAGTGACAGTGAACTGTACCAGGCTCAAATCCACTTGTACAAACATGTGAACAACTTCTTAAGCTCCATGGCTCTCAAGTCTGCTACGGAGCTAGGCATAGCAGATGCAATTCACAACCATGGAAAACCAATGACTCTTTGTGAGTTAGCCTCGGTTCTGAAATTGCACCCTTCAAAAGTTGGTGTTCTTCATCGCTTCATGCGTCTTCTAACACACAATGGCTTCTTTACCAAAACAACACAGAAGGGTAAAGAAGAAGAAGAAGAAACAGCTTATGCTCTCACTCTTCCTTCCAAGCTTCTAATCAGAAGTAATAACTCATCGTGCTTGGCCTCCATTGTTCGTGGAGCACTTCATCCAAGCACGTTTTACATGTGGAACTCCTCCAAGAAACTGTTCACTGAGGACACCGAACTCCCACTATTTGAGAGTGTAACTGGGGAGAGTTATTGGGACTTTATGAACAGTGATTTGGATTTTCTGAGCCTGTTTCAAGAGTCAATGGCAGCAGATTCTAAAATGTTCAAGCTTGGCCTCAAAGAATGTAAACATGTGTTTGAGGGTTTGGATTCTCTTGTCGATGTGGGAGGTGGGACCGGTGGTGTCTCAAGACTCATCCATGAAGCCTTCCCTCACTTGAATTGCGCTGTGCTTGACCAACCACATGTTGTGGCTAACCTGAATGGAACAGAAAATTTGAATTTTGTTGGTGGTGATATGTTCAAGTCCATTCCTTCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGACTGATGAACTCTCTATAAAGATATTGAAGAACTGCAAAGAAGCTATTTCTGGGAAAGGGAAAAAAGGAAAGGTGATAATAATAGACATAGTAATTGATGAAGCAGATGATGATGAGGAATTGACTGAGTTAAAGCTGGACTATGACTTGGTGATGCTGACTATGTTTAATGGAAAAGAAAGAGAAAAGAAAGAGTGGGAGAAACTAATATATGATGCAGGTTTTAGCAGCTACAAGATTACTCCTGTGTTTGGCTTCAAATCTCTCATTGAAGTTTATCCTTGATTTGTTAAAAGTTGCTTCAATCAATGTGTGTTGCAATTTCAATAAGTTTCTTCTTAGAAATCAAATCATTGTAGTATTTATTGCTTCATAGTAAGAATGAATTTCTGATAGTTCATAGGATATTCAAAACAATGT 1212 0.396 MDFSYSDSELYQAQIHLYKHVNNFLSSMALKSATELGIADAIHNHGKPMTLCELASVLKLHPSKVGVLHRFMRLLTHNGFFTKTTQKGKEEEEETAYALTLPSKLLIRSNNSSCLASIVRGALHPSTFYMWNSSKKLFTEDTELPLFESVTGESYWDFMNSDLDFLSLFQESMAADSKMFKLGLKECKHVFEGLDSLVDVGGGTGGVSRLIHEAFPHLNCAVLDQPHVVANLNGTENLNFVGGDMFKSIPSADAVLLKWVLHDWTDELSIKILKNCKEAISGKGKKGKVIIIDIVIDEADDDEELTELKLDYDLVMLTMFNGKEREKKEWEKLIYDAGFSSYKITPVFGFKSLIEVYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03920 358 Gene3D - 4 106 IPR036388 -
Pste3g03920 358 Gene3D Vaccinia Virus protein VP39 109 358 IPR029063 -
Pste3g03920 358 FunFam Coniferyl alcohol 9-O-methyltransferase 3 106 - -
Pste3g03920 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 357 IPR029063 -
Pste3g03920 358 PIRSF O-mtase 2 358 IPR016461 GO:0008168
Pste3g03920 358 FunFam O-methyltransferase ZRP4 110 358 - -
Pste3g03920 358 Pfam Dimerisation domain 28 76 IPR012967 GO:0046983
Pste3g03920 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 18 358 IPR016461 GO:0008168
Pste3g03920 358 Pfam O-methyltransferase domain 140 340 IPR001077 GO:0008171
Pste3g03920 358 PANTHER O-METHYLTRANSFERASE 11 343 IPR016461 GO:0008168
Pste3g03920 358 SUPERFAMILY "Winged helix" DNA-binding domain 7 110 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03920 Pste-Chr3 32564426 32565788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03920 28 356 Monolignol Biosynthesis Gene Families AT5G54160 33.735 1.06e-48 166