Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03919 GAAAGAGGTGATTTGATGGTTTTCCGAAAAAGCCAACCCCATAATTGAGTCTCTCCTCAAGAGCCCAAAAAGGGTGGGAAAAATGAAGAGAGAGTGATAGGTCAGTGGGAGAGAAAGACAGAGACACAGAAAGCGGGTCTCTTTCTTTTTGGAGTATTGGGTCGGGTTCTTTTGGCAATGCCAAAGTTGGTCACGCTCTCTGAAAATGCAGAAGGCATGAACGAAACCACTCACTCGCTCCACTCCTTCAAATATCTTCTTCTTCTTCTCTCCTCCTCTAACTCTCTCTTTTCCCCATGGCTTCTGCTTCTGCTTCTCCTCCCCTCATCGATCTCAACAACGCCACCGAAGATGACGAAACGCCGTCGTCTCAGCCCTCCTCCTCCTCCGTCTGCCTCGAACTCTGGCACGCCTGCGCTGGTCCTATGATTTCCTTGCCCAAGAAAGGCTCTCTTGTCGTTTACTTTCCTCAAGGACACTTCGAACACCAACAGCACCTTCACGATTTTCCGCTCCCCACAATCCCCTCCCATGTCTTCTGTCGCGTCCTCGATGTCAAACTCCATGTGGGTCTTCCCCTTTCTGTCCCCAAACACCGCAAAATTCGAAATGCTGTCGGTGCTGCCTTAAAGTTTGTGTTTTTTTGTTTTCTGCAGGCTGAGGAAGGGAGTGATGAAGTGTATTGCCAGGTCGTGTTGGTTCCCGAAACTGAGCAAGTGCAGCAGAAGTTGCAGGAAGGGGAAGTTGATGCTGATGGTGAAGAGGATGATTCTGAAGCTGTGATGAAGTCCACGACGCCCCACATGTTCTGCAAGACTTTGACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGTCGTGCTGCAGAAGATTGTTTTCCTCCTCTGGATTACAGTCAACAGAGGCCTTCACAGGAGCTTGTGGCGAAGGATCTGCACGGCCAGGAATGGAGGTTTCGACATATTTACAGGGGCCAGCCACGCCGACACTTGCTTACCACTGGATGGAGTGCATTTGTGAACAAGAAGAAACTTGTATCTGGAGATGCTGTTCTGTTTCTTAGGGGTGAGGATGGAGAACTGAGATTGGGAATCCGTAGGGCTGCTCAATTGAAAACTGGCAGTACCCTTTCCACTCTTCCTGGCCAGCAACTGAATCTTAGCAGTCTTATGGATGTGGTTAATGCTTTATCTTCAAGATGTGCCTTTAGCATTCACTATAATCCGAGGGTCAGCTCATCTGAGTTCATCATACCTATTCAGAAATTCTTGAAGAGCCTTGATTATTCTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAAACTGAAGATGCTGCAGAGCGAAGATTCACAGGATTAATTGTTGGAATTACTGATGTCGATCCTGTTAGATGGCCTGGATCAAAATGGAGATGCCTAATGGTAAGATGGGATGACTTAGAAGCCACAAGGCATAATAGGGTTTCCCCGTGGGAGATCGAGCCATCCGGTTCTGCGTCTACTGCGAATAACATGATATCAGCTGGTTTGAAGAGGACCAAGATTGGATTGCCTTCAGCCAAGCTAGAATATCCAGTTCCCAATGTGATTGGAACATCAGACTTTGGGGAATCACTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATACTAATTTTGATAGTATTAATTCTCAGAGTCATCAGCTATCTGATTTGAGGAGGTGCTATCCTGGCTCAAACTGTCCTAGGATTCCCGCAACAGGAAATAGCATTGGAATCCCACGAGTGAGTTCCAATGTTTCCTGCAATGGCATAGGCTTTGGTGAATCTTTTAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGGGCCCTTTCTGTTGATGAGGCTTGTGGAAATGGTCACTTTGGACCTTTTGATGGTTACCAGGCGCTGAGATCCCGCAATGGATGGTCTTCCCACATGAGTAACAATTCTTCACATTTGCATCCACCTGTTCCGTCGGGGCAAGTTTCATCTCCATCATCTGTGTTAATGTTCCAGCAAGCAGTCAATACAGTTTCAAACTCAGATTATAACAAAATTAGTCAGTCAATGGAATGTAAACTATTTCAACGAGGCTCGTATGCTTCTGAAGTGAAAGGTGGAAAATATGTATCAACCCCCTATGATCCTCTTCTCTGTGGACTACCTCAGGAAGGAGCAAATTCGTTTGGTCTTTCAAACCTGCATAATCAGTTAGATAGTTCTGGTTCACTTGAGTCGATTTCAGTACTGAGAGCCAGTCAAGAGTTGGTTCCCTCGTGTAAAAGTAGATGCAGAGTCTTTGGCTTTTCATTAACTGAGGGTGCTCCTGTTTCAAATAAAGAGGCTGCTGACCCTTCTGCTGTCACATGTTCTGGGCCAACCTTTAAAAGGCATGTTGAAGATAATTTTCATCCAGGGCATTCTCTCAGGAGCTAGGCTGTAGGAAGTTAGTTATTGCACCAAAGGTGTGATGCAATATTGACTTGGAAATCATATGATGTATTCTAGTAGTGATGCTGGCATGAGGTAGCGGAAGAGAATGTCCACAGTTGTGGTTATGTGCTTTGCTCAAGTAATTTGGAATATTAGAGACCAAAATGTTGTATCTATTCGCCTAATCTAGATATTTATCTTGTTAAATTGGCTATGACCACATTCAAGTTCCTGTATTAATCTTTCATACTCTTTGTATGACTTGACTTGTATTGGGAAAACTCAAAACGATATATATTACCCACCATTTTGGCCAAATGCTGAACAAAGTTAGCTAGGTGGCAGTGCATAACCCATCAATTATCTTTGTGGCCGT 2862 0.449 MASASASPPLIDLNNATEDDETPSSQPSSSSVCLELWHACAGPMISLPKKGSLVVYFPQGHFEHQQHLHDFPLPTIPSHVFCRVLDVKLHVGLPLSVPKHRKIRNAVGAALKFVFFCFLQAEEGSDEVYCQVVLVPETEQVQQKLQEGEVDADGEEDDSEAVMKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKTGSTLSTLPGQQLNLSSLMDVVNALSSRCAFSIHYNPRVSSSEFIIPIQKFLKSLDYSYSVGMRFRMRFETEDAAERRFTGLIVGITDVDPVRWPGSKWRCLMVRWDDLEATRHNRVSPWEIEPSGSASTANNMISAGLKRTKIGLPSAKLEYPVPNVIGTSDFGESLRFQKVLQGQEILGVNTNFDSINSQSHQLSDLRRCYPGSNCPRIPATGNSIGIPRVSSNVSCNGIGFGESFRFQKVLQGQEILPSQPYGRALSVDEACGNGHFGPFDGYQALRSRNGWSSHMSNNSSHLHPPVPSGQVSSPSSVLMFQQAVNTVSNSDYNKISQSMECKLFQRGSYASEVKGGKYVSTPYDPLLCGLPQEGANSFGLSNLHNQLDSSGSLESISVLRASQELVPSCKSRCRVFGFSLTEGAPVSNKEAADPSAVTCSGPTFKRHVEDNFHPGHSLRS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03919 730 SMART B3_2 171 273 IPR003340 GO:0003677
Pste3g03919 730 CDD B3_DNA 169 271 IPR003340 GO:0003677
Pste3g03919 730 Gene3D - 334 408 - -
Pste3g03919 730 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 696 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste3g03919 730 SUPERFAMILY DNA-binding pseudobarrel domain 163 278 IPR015300 -
Pste3g03919 730 Gene3D - 169 273 IPR015300 -
Pste3g03919 730 MobiDBLite consensus disorder prediction 1 28 - -
Pste3g03919 730 Pfam B3 DNA binding domain 171 272 IPR003340 GO:0003677
Pste3g03919 730 ProSiteProfiles B3 DNA-binding domain profile. 171 273 IPR003340 GO:0003677
Pste3g03919 730 FunFam Auxin response factor 169 273 - -
Pste3g03919 730 FunFam Auxin response factor 334 405 - -
Pste3g03919 730 Pfam Auxin response factor 298 378 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03919 Pste-Chr3 32533343 32539485 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03919 170 528 B3 DNA Binding Superfamily AT2G33860 59.722 1.30e-143 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pste3g03919 B3 9.2e-23 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03919 3 32533343 32539485 Pste3g03919 3 32533343 32539485 ECH