Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03915 TATTACACTATTAGGGAACTGATTTTCACATCCCTACCAAAAACAAGAGGGAGCTGATATTGTGAAAGAAATTAAGGATCTGTTTTGGGATATATGGGCATATAGAAGCTAGCTAGAAAGAGATGACATGGTGCAATGACTCAGATGAGGATAGGGGAATTGAAGAACTGGTCACACCCACTATTACTCCTACAACGAATAACAACCTTGTTAGTAACACAAAACCAACAGAAATTCGCACCCTAACTTGCCCCTCGTGTGGCCACAACATTGAATTCCAAGAACAGAGTGGAATCAATGATTTGCCGGGGTTACCAGCAGGGGTGAAGTTTGATCCGAATGACCATGAGATATTAGAGCATTTGGAAGCAAAGGTACTGTCTGATATGCCAAAGCTGCATCCCCTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAACGGGATCTGTTATACGCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAGATCCGACACTTCTTTCATAGGCCATCAAAAGCATACACAACAGGAACAAGGAAGAGAAGAAAGGTTCACACAGACGAAGAAGGAAGCGAAACAAGGTGGCACAAAACAGGAAAAACCAGACCAGTTTTTGTTGGTGGTGCAGTTAAGGGTTTCAAGAAAATCCTTGTCCTCTACACCAACTATGGGAGGCAAAAGAAGCCTGAGAAGACCAATTGGGTGATGCATCAATACCATCTTGGAAGCAATGAAGAAGAGAAAGATGGGGAAATTGTGGTTTCAAAGGTCTTCTTCCAAACACAGCCTAGACAATGTGGTAATTCCATTATGAAGCAGGATCTTTATGATGAAGAAAGATTGACTAACCAAGGTGTCGTCCATGATGATCACAATATCAGTGTCATACCTAAAAGTGCAACAACTCTCATGGACTATTACAATGCTCCTTTCATAAATTATGAGCATGGTGTGAGTGGTCGTAATAATAGGGAAACTTCACCTCAACTTATTCCAAATTTGGTTGTGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAACAAAGCCAGGATGGAAAGAAAATAG 1091 0.4143 MTWCNDSDEDRGIEELVTPTITPTTNNNLVSNTKPTEIRTLTCPSCGHNIEFQEQSGINDLPGLPAGVKFDPNDHEILEHLEAKVLSDMPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGEIVVSKVFFQTQPRQCGNSIMKQDLYDEERLTNQGVVHDDHNISVIPKSATTLMDYYNAPFINYEHGVSGRNNRETSPQLIPNLVVQGDSSSFIRLAMDATNKARMERK 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03915 322 Gene3D NAC domain 73 227 IPR036093 GO:0003677|GO:0006355
Pste3g03915 322 ProSiteProfiles NAC domain profile. 64 223 IPR003441 GO:0003677|GO:0006355
Pste3g03915 322 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 22 254 IPR044799 GO:0003700
Pste3g03915 322 FunFam NAC domain-containing protein 73 73 227 - -
Pste3g03915 322 Pfam No apical meristem (NAM) protein 65 204 IPR003441 GO:0003677|GO:0006355
Pste3g03915 322 SUPERFAMILY NAC domain 58 223 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03915 Pste-Chr3 32376114 32379552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03915 1 234 NAC Transcription Factor Family AT4G28500 71.064 1.25e-123 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g03915 NAM 3e-21 No_clan