Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03913 AATGACAAACCCACTCTCACTCACACTCACACTCTCGATTCTCTTCTCAGTTGTGGCGTGGGTGTCGTGTCTGAACCAAGAAGGGTTATACCTCTACCAACTGAAGCTGTCCTTGGACGACCCTGACTCGAGACTCTCCTCATGGAACTCAAGAGACAGCACTCCCTGCAACTGGTTTGGGGTAACCTGCGACCGCACCAACACCACTGTAACAGAACTCGACCTCTCCGACACCAACATCGGAGGCCCCTTCCAGGCCAACATCCTCTGCCGCCTCCCCAACCTCACTTACGTTAACCTCTTCAACAACTCCATCAACCAAACACTCCCCCACGACATATCCCTCTGCGCCAACCTCCAACACCTCGACCTCTCCCAGAACCTCTTAACCGGTCCCCTCCCCAACACTCTCCCCAAACTCACCAACCTCCGCTACCTCGACCTCACCGGAAACAACTTCTCCGGCCCCATCCCCGACACCTTCGGAACCTTCCAAAACCTCCAAATTCTCTCCCTTGTCTCCAACCTCATAGAGGGCACCATTCCTTCCTCCCTCGGCAACATTACCACTTTGAAAATGCTCAACCTTTCTTACAACCCTTTTTTCCCCGGTCGGATTCCGCCCCAGATTGGTAACCTCACCAACCTCGAGGTGCTCTGGCTCACCCAATGCAATCTCGTCGGTGTCATCCCCACTGAGCTCCGCAACCTCCACAAGCTCCAGGACCTCGACCTCGCTCTCAACGACCTCTATGGCTCCATCCCGAGTTCCCTCACTGAGTTAACCAGCCTCACTCAGATCGAGTTGTACAACAACTCCCTCTCCGGGGAGCTTCCTCTCCGAATGGGGAATCTCACCAAGTTGCGGCTTCTCGACGCGTCCATGAACCACTTGACTGGGAGGATTCCCCAAGAGCTTTGCTCTTTGCCCTTGGAAAGTCTCAACCTTTACGAGAATCGCTTCGAGGGTGAGCTGCCCTCCACCATTGCGGATTCCAAGAATTTGTACGAGCTTAGGCTCTTCGGGAACCGCCTCACCGGAAGGTTACCCGCGAATCTCGGTAAGAATTCGCCGCTCCAGTGGCTCGACGTTTCCAGCAACCAGTTCTGGGGCACTATTCCGCCGACGCTGTGCGATATGGGGGTGTTGGAGGAGCTTCTCGTCATATACAACCTTTTCTCCGGGGAGATTCCGGCCAGCCTCGCCACGTGCCAGAGCTTGACACGTGTGAGGCTCGGCTTCAACCGTCTCTCCGGCGAGGTTCCCGCCGGGATCTGGGGGCTGCCCCACGTGTATTTGCTCGAGCTTGTTGATAACTCGTTTTCCGGGTCCATTGCGAGGACCATTGCTGGTGCTGGGAACTTGTCGCTGTTGATTTTGTCGAAGAACAACTTCTCCGGAACGATTCCCGATGAGGTTGGGTGGTTGGAGAATCTCGTGGAGTTTTCCGCTAGTGATAATAAGTTCACCGGTTCACTTCCTGATAGGATTCATTCGTGGAAGAAGCTCAATGATTTGAATTTGGCCAACAATGAGATTTGTGGAAGCATTCCCGATGAGATTGGGGGTTTGTCTGTGCTGAATTTTCTGGATCTTTCCAGAAACTGCTTTACGGGTAAAGTCCCTCACGGGTTGCAGAATCTGAAGCTGAATCAGCTCAATTTGTCTTATAATCGTTTGTCTGGTGAACTTCCTCCTATGTTGGCTAAGGATATGTATAGGTCTAGTTTTCTCGGGAATCCTGGCTTGTGTGGGGATTTGAAGGGGTTGTGTGCTGGTAGGGCTGAGGCCAAGAGTCTGGGTTATGTTTGGTTGCTTAGAACCATTTTCGTCGTTGCCACTTTGGTTTTCCTTGTTGGTGTGGTTTGGTTTTACTTTAGGTATAAGAGTTTCCATGATGCAAAGAGGGCGATTGATAAGTCAAAGTGGACGTTGATGTCCTTTCATAAACTGGGTTTTAGTGAAGATGAGATTTTGAATTGCCTTGATGAGGATAATGTGATTGGGAGTGGTTCCTCTGGGAAGGTCTACAAGGTTGTGCTTAGCAGTGGGGAGGTTGTGGCTGTGAAGAAGATATGGGGAGGGGTTAGGAAAGAGGTAGAGAGTGGGGATGTTGAGAAGGGTAGAGTACAGGACAATGCTTTTGATGCCGAGGTTGAAACTTTGGGCAAGATCAGGCACAAGAACATAGTCAAGCTGTGGTGTTGCTGCACCACAAGGGATTGCAAGCTCTTGGTTTATGAATATATGCCGAATGGAAGTCTTGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACAAGGTATAAGATAGCTGTGGATGCTGCAGAGGGCCTCTCTTATCTGCATCATGACTGTGTTCCCGCAATTGTTCATAGAGATGTGAAATCTAACAATATTTTGTTGGATGGGGACTTTGGTGCGAGGGTGGCAGATTTTGGAGTAGCTAAGGCAGTTGAAACCACACCCAAAGGAACTAAATCTATGTCAGTCATAGCTGGCTCATGTGGCTATATTGCACCAGAATATGCATACACCCTTAGGGTGAATGAGAAGAGCGACATATACAGTTTTGGGGTGGTCATACTTGAGTTGGTTACCGGAAAACGCCCAGTGGACCCTGAATTTGGGGAGAAAGACTTGGTTAAGTGGGTGTGCACTACCTTGGACCAGAAAGGGGTGGACCATTTAATTGACTCAAGACTTGAAACTTGTTTCAAAGAAGAAATTTGCAAGGTCTTCAACATTGGACTCATGTGCACTAGTCCTCTTCCTATCAACCGGCCTTCAATGAGAAGAGTGGTGAAGATGATGCAAGAGGTGGGCACAGAGAACCAACCGAAACCTGCAAAAAAAGATGGCAAATTATCCCCTTGTTACTATGACGATGTCTCGGATCATGGAAGTGTTGCTTAATGAACAGTTGCAAGGCTTGTACTATTTCATGATCCTAAAGGGGGAGTCAGAAGCTTTCCTATTACTATAAGCCAGCTTCCCTCCATGTTTTCCGGGCATGCTTTGCTTTACAAGATTGACTAAAGAAAGGAAAATTAGAAAATAGGATTTTTTTTTGGGGTGGAAAATAGAGGCTTGAGGAGTTCATGTTTTACCCTATAAACTAAAGTATGTCCATATCAAGAAGCTTCCCTACCAAATTTAATTTGGTGTTTGATTTACAAACTTGTATTCAGAAATCAGAAATTATATTTCCATCCTTTAAAAGGTTCTTCTTTAAGGACATTTATTGGGAAAACTTTTAGCTGACTGTGGCATGGCCAAATTGTAATATCAATCAGATAATGACTTTCAAATTCTGTTTTTTTATGTTTTTAAA 3347 0.478 MTNPLSLTLTLSILFSVVAWVSCLNQEGLYLYQLKLSLDDPDSRLSSWNSRDSTPCNWFGVTCDRTNTTVTELDLSDTNIGGPFQANILCRLPNLTYVNLFNNSINQTLPHDISLCANLQHLDLSQNLLTGPLPNTLPKLTNLRYLDLTGNNFSGPIPDTFGTFQNLQILSLVSNLIEGTIPSSLGNITTLKMLNLSYNPFFPGRIPPQIGNLTNLEVLWLTQCNLVGVIPTELRNLHKLQDLDLALNDLYGSIPSSLTELTSLTQIELYNNSLSGELPLRMGNLTKLRLLDASMNHLTGRIPQELCSLPLESLNLYENRFEGELPSTIADSKNLYELRLFGNRLTGRLPANLGKNSPLQWLDVSSNQFWGTIPPTLCDMGVLEELLVIYNLFSGEIPASLATCQSLTRVRLGFNRLSGEVPAGIWGLPHVYLLELVDNSFSGSIARTIAGAGNLSLLILSKNNFSGTIPDEVGWLENLVEFSASDNKFTGSLPDRIHSWKKLNDLNLANNEICGSIPDEIGGLSVLNFLDLSRNCFTGKVPHGLQNLKLNQLNLSYNRLSGELPPMLAKDMYRSSFLGNPGLCGDLKGLCAGRAEAKSLGYVWLLRTIFVVATLVFLVGVVWFYFRYKSFHDAKRAIDKSKWTLMSFHKLGFSEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEVVAVKKIWGGVRKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPAIVHRDVKSNNILLDGDFGARVADFGVAKAVETTPKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKRPVDPEFGEKDLVKWVCTTLDQKGVDHLIDSRLETCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMMQEVGTENQPKPAKKDGKLSPCYYDDVSDHGSVA 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03913 975 ProSitePatterns Serine/Threonine protein kinases active-site signature. 794 806 IPR008271 GO:0004672|GO:0006468
Pste3g03913 975 SMART serkin_6 662 942 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03913 975 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 233 944 - -
Pste3g03913 975 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 380 469 - -
Pste3g03913 975 SUPERFAMILY RNI-like 72 434 - -
Pste3g03913 975 Pfam Protein kinase domain 664 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03913 975 MobiDBLite consensus disorder prediction 945 975 - -
Pste3g03913 975 SUPERFAMILY Protein kinase-like (PK-like) 657 942 IPR011009 -
Pste3g03913 975 FunFam Leucine-rich repeat receptor protein kinase EMS1 185 265 - -
Pste3g03913 975 SMART LRR_typ_2 213 236 IPR003591 -
Pste3g03913 975 SMART LRR_typ_2 92 116 IPR003591 -
Pste3g03913 975 SMART LRR_typ_2 237 261 IPR003591 -
Pste3g03913 975 SMART LRR_typ_2 285 309 IPR003591 -
Pste3g03913 975 SMART LRR_typ_2 140 163 IPR003591 -
Pste3g03913 975 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 750 959 - -
Pste3g03913 975 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Pste3g03913 975 ProSiteProfiles Protein kinase domain profile. 662 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03913 975 SUPERFAMILY L domain-like 391 569 - -
Pste3g03913 975 Gene3D Ribonuclease Inhibitor 309 592 IPR032675 -
Pste3g03913 975 Gene3D Ribonuclease Inhibitor 180 308 IPR032675 -
Pste3g03913 975 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Pste3g03913 975 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 470 591 - -
Pste3g03913 975 Gene3D Phosphorylase Kinase; domain 1 646 749 - -
Pste3g03913 975 FunFam Receptor-like protein kinase HSL1 646 749 - -
Pste3g03913 975 FunFam Putative leucine-rich repeat receptor-like protein kinase 266 379 - -
Pste3g03913 975 ProSitePatterns Protein kinases ATP-binding region signature. 668 691 IPR017441 GO:0005524
Pste3g03913 975 Gene3D Transferase(Phosphotransferase) domain 1 750 965 - -
Pste3g03913 975 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 24 184 - -
Pste3g03913 975 MobiDBLite consensus disorder prediction 950 964 - -
Pste3g03913 975 Gene3D Ribonuclease Inhibitor 24 179 IPR032675 -
Pste3g03913 975 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pste3g03913 975 Pfam Leucine Rich repeat 66 82 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03913 Pste-Chr3 32340180 32344035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03913 21 975 Receptor kinase-like Gene Family AT1G28440 68.966 0.0 1376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste3g03913 Pkinase 2.1e-42 CL0016