Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste3g03889 | TGCCTACACTGATAACAATGTCACCACAGAGGCACCCTCATGAAGTTCCATTGGAGTTTGCTCTAACAAATGACCACGAGCAACCCCACAAAGTAGAACAACTTGATGATGAAGTTGAGTCAAATGAAAGCCAGTTTTCAAGCGATAAGGATGAGGACGAATATATGGTTATAGATTTGGCAAATTTGAAGGAACTGCATTGTCCTATATGCCTAGGATTCATTCGAAAAACAGCAGTTATGATGGAATGCATGCATCGATTTTGTAGAAAATGCATAGAGAAATCACTACGTCTAAGTAAAAATGAATGTCCTGTTTGTCGGGTACATTGTCCTAGCCGGCGCTTCCTTAGGGATGACTTGAACTACGACGCATTAATTTCTACTTTTGTCCCAAATATTGATGAGTCTCAGAAACAGGAGGATTATGCTTCACAAGTAGATGAGAAGATTCATAATAAAGAGATCCAAGCTTCCAATGCCCAGACTCTTCAACCTCAAACCCAAGCTTTGGATAGGAAACAAAAAGCCAGGGCAATAGCATTAGCTTTTGAGAGAAGGAGGAGATCAATAGGAAAAGACTTGTCTTTTGGTGATGAGAACAAAGAAACCAAAACAAGTGAAGGTGGAGAAAAAGAAACCCAATTTCCACAAGAATTTGTCACAGTCAATGTAGATGGTTCATCTACACATGGTCATCGAAGTAACGCTCAAGTTAGTGGAGGGAATTCTATAAGTAATCGTCTCTCTAGATTTATTGATCATCTTCATAAATCGGATGTAAATGATGATGAGATTCCCCTCGTGCTTGTCTCTTTGGATAAGCAAAAGATACCAAGTTTGCACGAGGCATTACTTTCCTGCAGGCCTACTATGTCAATAAAGATATTGTCCAAGTATGTTGCACTTAAAGTTGAGTTGTTAGTCGATCAAGTTGAATTATACTTGGTAGAAGATTCACAAGTCAACATAATAAGAGGTGAATTAACCATTGATCCAGACAAGGACAAAGTGCGCATTCTAAGAGATGAAGAAACTTTGGTTGAACTATACACTAGGAATGTCAGGAACCCTGGTTTTCTGAGTATGGGGAGGGTTTTTGTTATTGAATTGGATGGCAGATCTTATGGATGCAAATTCTGCAATACCCCTCTTGCCCTCGCTAATCACATTCTTTCTCGGTCAAGGGAGAGCATACCTTTTCAGCAAAGTGTAATTATTATCGCACTTCATGTCAATCTTACATCAATATTTGTTCAATATTTTTTTATGATTGATATTTTGTGGTCTCACTTAACCAGGGTCTCCCCACCCTCAGGGTCCTTCCCCCACCCTAAAGCATCTACACCTCTATCGGTCTGGGGAATGGGAATGAAGCATATGGCATCCTTGATTGTTAACTTTTGCCTCTATCCTTGTTTGTTAACTTTTGCCTCTAATAGGGTGAATGTGACACTTGGGCCTCAGGTGGACAGAATGATGATGTCTGGACTGCACACCGTTGAAGACATATTTTGTTGCTGCTGTGGACAAATTCTTGGATGGAAATATGTTCTAGCACATGAAAAGAATGAAATATACAAAGAAGGGAAGTTTGTGCTTGAGAGGTGGACTATAGTTGACAGTGTTGAAGATGAGGACTTAAATTCGGATGTTCAAGGTGGCTCTCAAGCTGGTTCAAGTGACACAGAAAACGCTTAGCTAATGGCTTCTTTTTCATCAATTTGAAGTATTGTAGCTAGCAATTATATTATAGTATTATACCTTTTAGTGTCCTAGGTTGCAAATATATTATACCTTTAGTATTCATCAAGATACAATTTTACATAGAAACTCCTTAGAGAAACTTAAGCTTAGTTCATTTCCAGCATTTATAAATATTGCCGTAGCGCACATTGCTATATATTTATGAAGGGCATATAATTCATCTTATATTGAATCGAAGATCTTTATACTCTTCTTGATCTCAATAATTCAAATATATGTGTGG | 1989 | 0.3826 | MSPQRHPHEVPLEFALTNDHEQPHKVEQLDDEVESNESQFSSDKDEDEYMVIDLANLKELHCPICLGFIRKTAVMMECMHRFCRKCIEKSLRLSKNECPVCRVHCPSRRFLRDDLNYDALISTFVPNIDESQKQEDYASQVDEKIHNKEIQASNAQTLQPQTQALDRKQKARAIALAFERRRRSIGKDLSFGDENKETKTSEGGEKETQFPQEFVTVNVDGSSTHGHRSNAQVSGGNSISNRLSRFIDHLHKSDVNDDEIPLVLVSLDKQKIPSLHEALLSCRPTMSIKILSKYVALKVELLVDQVELYLVEDSQVNIIRGELTIDPDKDKVRILRDEETLVELYTRNVRNPGFLSMGRVFVIELDGRSYGCKFCNTPLALANHILSRSRESIPFQQSVIIIALHVNLTSIFVQYFFMIDILWSHLTRVSPPSGSFPHPKASTPLSVWGMGMKHMASLIVNFCLYPCLLTFASNRVNVTLGPQVDRMMMSGLHTVEDIFCCCCGQILGWKYVLAHEKNEIYKEGKFVLERWTIVDSVEDEDLNSDVQGGSQAGSSDTENA | 560 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste3g03889 | 560 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 132 | IPR013083 | - | |
Pste3g03889 | 560 | PANTHER | OS11G0578200 PROTEIN | 225 | 351 | IPR044592 | - | |
Pste3g03889 | 560 | ProSitePatterns | Zinc finger RING-type signature. | 78 | 87 | IPR017907 | - | |
Pste3g03889 | 560 | MobiDBLite | consensus disorder prediction | 187 | 207 | - | - | |
Pste3g03889 | 560 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Pste3g03889 | 560 | MobiDBLite | consensus disorder prediction | 12 | 44 | - | - | |
Pste3g03889 | 560 | ProSiteProfiles | Zinc finger RING-type profile. | 62 | 102 | IPR001841 | - | |
Pste3g03889 | 560 | Pfam | Yippee zinc-binding/DNA-binding /Mis18, centromere assembly | 371 | 532 | IPR004910 | - | |
Pste3g03889 | 560 | CDD | RING-HC_RING1-like | 59 | 124 | - | - | |
Pste3g03889 | 560 | Pfam | Zinc finger, C3HC4 type (RING finger) | 62 | 101 | - | - | |
Pste3g03889 | 560 | SUPERFAMILY | RING/U-box | 49 | 109 | - | - | |
Pste3g03889 | 560 | SMART | ring_2 | 62 | 101 | IPR001841 | - | |
Pste3g03889 | 560 | MobiDBLite | consensus disorder prediction | 187 | 206 | - | - | |
Pste3g03889 | 560 | ProSiteProfiles | Yippee domain profile. | 434 | 537 | IPR034751 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste3g03889 | Pste-Chr3 | 31833200 | 31850903 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste3g03889 | 60 | 248 | C3H Transcription Factor Family | AT2G30580 | 24.631 | 1.97e-07 | 51.2 |