Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03883 GGCAACCATGGGTGTTTGGCTCTTGCGGTCGCGGCATTAACGGTTTCAGTCTTGCGGTCAACTATTCGTACGTGGAGACACTTGGTACGGACAGTAACAAAGTAGTTCCTATGTAGATTATTATTCCAATTCTAGGTTCTAGCGAAGTGTGAGGTATGGCGGAGATTTCAAGTTCAGGGTACAAGGATTATTTGGCTGGCTTGTTCGCTGGTGTTGCCGCTGTGGCTACTGGCCACCCATTTGACACCGTTAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTATAGAAATGGAATGGAATGCACTGCTAGGATATTGCAGACTGAAGGAATCAAAGGGCTTTATAGAGGAGCAACATCATCTTTTATTGGGATGGCAGTTGAAGGATCACTCTTTTTTGGCATTTATTCCCAGATAAAACTGCACCTTCAGGGGGGAGTTCAAAGTGGGGAACCACGGCCTCAAGTGATAATACCATCTGCAGCTTGTAGCGGTGCCATCAACAGTTTTGTCTTAGGTCCAACAGAGCTAATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCTATATCCAGCAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACAGTAAAAATTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTATTCAACATTGCTTAGAGAATCTATAGGGAATGCTGTCTTTTTTTCTGTGTACGAATATGTGCGTTATCACATGCATTCAAATATAAAAGTTGATTCATCCAATTATAGCAACCTGGTTGATATTGGAATTGGGATCGTGACTGGTGGCCTTGGTGGTGTGGCTGTAAGCTTGTTGATAATAACTAAGCATTTTTGGTTGACGGTTTTGCCTCTTGATGTTGCAAAGACTTTAATTCAGACAAACCCAGATAAAAATTGTCCAAGAAATCCTTTTCGGATCTATAAAAGGGCTGGAGTGAAGGGGTGCTATACCGGTTTGGGTCCTACTATAGGTCGAGCATTTCCTGCGAATGCTGCAACAATTGTCGCATGGGAGCTAGCATTGAAAATGCTGGGCATTAAGCGTGGCTGAGGTTGGTGCCTTTCAAATTTCAACTGTGATATTATGACTTTCTCATCACTAGCATCAACGGGTGATTAGCACAGGTAAGCTTTCCATACTACAATTGTTGACATTAGATGAGATCTGGTGGGAAGATAACAGTGCTTTTAGTTGAAAGCTTTTTACCTTGGAAGAGTTTCTAATTTTTAATTTTTTGTCTTTTACTAGGACAGCATTCAGCATTGCATTTGAAGCTGCTTATTTAATATTTTTTTATTAGAGAGCTTGGTTAGCAAACTTGGAATCAGAGGCCTTGATTTTAGCTGTCCTCTACATGTTTTTTCCCCTTCAATTTTTTTCTTTTTATATATATATATAGAACATTTCTATAACTACCGTGAAATTATATTTTTAATGGCCATTGAGG 1485 0.4054 MAEISSSGYKDYLAGLFAGVAAVATGHPFDTVKVMLQKHNAEAHMIQYRNGMECTARILQTEGIKGLYRGATSSFIGMAVEGSLFFGIYSQIKLHLQGGVQSGEPRPQVIIPSAACSGAINSFVLGPTELIKCRMQIQGTDSLVPISSRYSSPLDCALKTVKIEGVKGIFRGGYSTLLRESIGNAVFFSVYEYVRYHMHSNIKVDSSNYSNLVDIGIGIVTGGLGGVAVSLLIITKHFWLTVLPLDVAKTLIQTNPDKNCPRNPFRIYKRAGVKGCYTGLGPTIGRAFPANAATIVAWELALKMLGIKRG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03883 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Pste3g03883 310 FunFam Mitochondrial carrier protein 2 109 - -
Pste3g03883 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Pste3g03883 310 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 304 IPR018108 -
Pste3g03883 310 Gene3D Mitochondrial carrier domain 9 308 IPR023395 -
Pste3g03883 310 SUPERFAMILY Mitochondrial carrier 8 299 IPR023395 -
Pste3g03883 310 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 305 - -
Pste3g03883 310 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Pste3g03883 310 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Pste3g03883 310 Pfam Mitochondrial carrier protein 240 305 IPR018108 -
Pste3g03883 310 FunFam Mitochondrial amino acid carrier 180 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03883 Pste-Chr3 31600230 31606179 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03883 25 305 Antiporters AT1G79900 28.920 2.72e-31 117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03883 3 31600230 31606179 Pste3g03883 3 31600230 31606179 ECH