Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03882 AAATTACCAAGTGTGAAGAACAAGGGTTTGTTTTGTTTTTGTCTGTAGCCTTTGCTAGGTTTTATTGAATCGTACATACCTAAGGCTTAGCTACTTTTTGTTTCCGACCTTTTTACTGTTACCTCTAGTTGTCAACAAAAAACTGGAGACCAAGACCATTAGACGAAGACCCTATGTGGTCCTTACCCATTCTCTAATATCCTATTTACCCTTCTGGGTTTTAACTATTTATATCAAATATTTATGCTCATGTCCTTCTTATGAAACTTATTCTGAGCCTTTTTTTCCCACAACCTTCTTCTGGATCTCTGTGAAACTTATGGACACAAGCAGGTCTGAGGGGAAAAGGGTCTTGAGGTACAAAGAGGAGGATGATGAGGATGAAGAAGAAGAGGAAGAGGTGAGTGAGATGGGTTTTGGAGAAGAGGGAAGGAAGAATAAGAGAGTAATTACAGATCTCTATGGAAAGCGAGGGTCCAAAGGTGGAAGCTCAATGCCACCTTCTTGTCAGGTGGATAATTGTGATGCTGATCTAAGTGAAGCTAAGCAGTATCACAGAAGACACAAAGTTTGTGAGTACCATGCCAAGGTTCATTCCGTACTCATGGCAGGGCTGCAAAAAAGGTTTTGCCAACAATGTAGCAGGTTAATCTTTTGCTGTGAACTGCTTGAGGGAAAAGGTTTGATTAGAATTTTGTTAGTTATAATTATATACATGTATTTTTTTTTTCAAGCAGCCCTAGCTAGTTTTGAGGAAGGGAGAAAACCCTTCAATTTGATAATATGGCACTTGATTGGAGGGGAAATGGGACATGTGCTTAGGCTTTATCTTGTGTCTTGCGCCAAGGCTCACCCTCTGCTTCTTTTGTTTCCAAGTATTTTGTTTCTTTCTCCAAATCCCTGTAATAAACTATTCCTTACTTATATTGATTTATTGTCATCAACAAAGATAGCAACTCCAAAAATGGAAAATCTTGGGTATAGAGGATTCTCTTCATTGCCCTGATTATAGAACGCACATTTTTATATAACATTATAGAAAGTTAGAAACCAATGACGGAATTAATGTGCTCAAAGCCAATCCTATTACTATAACATTAATATAGGGACTCATCTCAAATCAATATATATCTTAATTACACCAACATATAACACCAACATATATGATGTGACAATGACATTTCTGGTAACTGACATTGTCTTTTAAGCATGTGATTAGATATCAGCTTTCCATATTCATATCTATGAAAAAACCTTTGTCAGAAATGTTAATTCATCTAACAAGAATATATCTTAGTTTGCTGCTAGATCTATTCTGAATAGCATTTACCAAATACTCCTAATATTTATCCATCTTATACTTTTGACCGTTTAGATTTGGAAGTACTTTTTAGAAGATCCATTAGGTTGACAGGATACAATTTTAGTGGGATGTGTCTTTTGTTGATAAATGTATATTACCCTAAATAATGCATTAAGATTATCAATAGTAATATGGTATTGGTTAAAATTTTTCATAATCTTGATGCATTATTTAGGGTAATATAATATCAACACAAGACAAATCCTTGTACATTGATAGTATAATTACATAAACTTTCTTTAAGCCGATTGAAGAGAAGATTTAATCTTGTCCTGGTTTGTTTTGAAGCAAACTAAATCAACTGATAGAAAAACATAAATTGCTCTTAACTGGAACAAACAATTCAAAGTCTAGTAAATTTTTCGTAGGAACTAACTTTTCTTCAATTAAAATGCTGTTTTTCAGGTTCCATGAGGTGTCAGAATTTGATGATTCAAAACGGAGTTGTAGAACGCGATTGGCTGGACACAATGAGAGGCGTCGCAAAAATGCAGTTGACTAACATGGAGAATTATTTTTTTCTATGAAATGGACATTAATAAACCTTGAGGCAAGCATGTGATCAAATAAATTTTTCCCACCGAAATCTTCATCATTAAATCATTGTTGCTGGTCTCTGAGGATGCTCTCTATCTTCTGTCAATATATCATGTGCAAAGATATATTGTTGCCGTTAGTTTTGATTGTTGCAGTTAGTTACAACTATGTAATGCCGTTGGTTTGGGAGAACTGGAATGAAGGGACTTTAATTGAGTTTCATGGTTTGGTTAAAAAATAATAAAGGGAGGGAGAGATATTTTAATCACTTCTCTCTTCAATTTGATTCAAAATTTAGAAGAAAAGGCAAAGGAGATAAAATATCCCCTCTTTGTTTCGTACCCCTTTGAAGTGAGG 2257 0.3469 MDTSRSEGKRVLRYKEEDDEDEEEEEEVSEMGFGEEGRKNKRVITDLYGKRGSKGGSSMPPSCQVDNCDADLSEAKQYHRRHKVCEYHAKVHSVLMAGLQKRFCQQCSRLIFCCELLEGKGLIRILLVIIIYMYFFFQAALASFEEGRKPFNLIIWHLIGGEMGHVLRLYLVSCAKAHPLLLLFPSILFLSPNPCNKLFLTYIDLLSSTKIATPKMENLGYRGFSSLP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03882 228 MobiDBLite consensus disorder prediction 17 31 - -
Pste3g03882 228 Pfam SBP domain 63 110 IPR004333 GO:0003677
Pste3g03882 228 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 32 109 IPR044817 GO:0003677
Pste3g03882 228 Gene3D - 53 150 IPR036893 GO:0003677|GO:0005634
Pste3g03882 228 MobiDBLite consensus disorder prediction 1 38 - -
Pste3g03882 228 ProSiteProfiles Zinc finger SBP-type profile. 60 137 IPR004333 GO:0003677
Pste3g03882 228 MobiDBLite consensus disorder prediction 1 16 - -
Pste3g03882 228 SUPERFAMILY SBT domain 61 119 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03882 Pste-Chr3 31585190 31587654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03882 44 111 SBP-box Gene Family AT1G02065 53.425 2.18e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pste3g03882 SBP 8.6e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03882 3 31585190 31587654 Pste2g02025 2 20502917 20504678 PCT