Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03874 GTTTTATTTTATGAAACCAAGAGCATCCTTAAGGGTTATTAATGGAGAACAACCCTAGTTCATCAAAAGATGTTAGAAAAATCATCGAGAGGAATAGACGAGATCAAATGAAGGCTCTTTTCAACCAGCTCAAATCAGTTTTACCTCATAAAATCTCAAGGGAAGCCAGTTCGCGACCGGATCAGATAGATGAAGCCACAAACTACATAAAGAATTTGCAGATTAAGTTGGAGAAAATGAAGGAAAAAAGAAACAGCCTAAGAGACATTATTGAAAGGTCAAAAAATGCAAGAATTAATATGGGGTTGAAGGCTCCACAATTAAAGATCAAACAAATGGGTTCAGCCGTAGAGATTGTTCTAATAACTGGGTTGGATTGTCAGTTCATGTTCAATGATACCATTCGTATTCTTCAAGAAGAAGGATCAGATATTGTT 437 0.3593 MENNPSSSKDVRKIIERNRRDQMKALFNQLKSVLPHKISREASSRPDQIDEATNYIKNLQIKLEKMKEKRNSLRDIIERSKNARINMGLKAPQLKIKQMGSAVEIVLITGLDCQFMFNDTIRILQEEGSDIV 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03874 132 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 132 - -
Pste3g03874 132 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 7 59 IPR011598 GO:0046983
Pste3g03874 132 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 74 IPR036638 GO:0046983
Pste3g03874 132 Pfam Helix-loop-helix DNA-binding domain 11 60 IPR011598 GO:0046983
Pste3g03874 132 Gene3D - 1 89 IPR036638 GO:0046983
Pste3g03874 132 Coils Coil 49 83 - -
Pste3g03874 132 SMART finulus 13 65 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03874 Pste-Chr3 31321857 31322403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03874 2 132 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.095 5.77e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste3g03874 HLH 2.7e-08 No_clan