Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03862 ATGCTCAGTCAACAAACACACAAAGAAGAAGATGATGAAGGTCCACCTCCTGGATGGCAGCCCATCCCCACTCAGCCACCGCCACCGTCACCGTCACCGCCACCGCCACCGCCACCGCCACCGCCACCGTCACGTCCTTCCGCTGCAGAAAGGGATATGGATGCAATATTTCAATTTCTGTGGCTTGAAGTCTGTGAGAGGGTTAAAGGAAGTGGTTGTTTGTTGCTGGATTGTTGGGCTCAATTGGTTTGCGGTTCTTGTCGTCGCCTGCTTTTGTATCCACGAGGTGCCAAACATGTCAAATGTTCATGCTGTCAGACTGTCAACATTGTATTAGAAGCTGACCAGGTGGGGCAGGTTAAGTGTGTCAGTTGTGCAGTATTGCTAATGTACCCATATGGTGCTTCTCAGGTTAGATGTTCCTCATGCCGATTTGTGACAGAAATTGGGGCACACAATAAGCGACCTCCATGGTCTGTACAACAAAGGAAACCAACTCCTCCGAAAGCTGGCTGTTAGTGGTCTGTCCGTTGGCCTAGTTAATGTATCAAACAA 555 0.4973 MLSQQTHKEEDDEGPPPGWQPIPTQPPPPSPSPPPPPPPPPPPSRPSAAERDMDAIFQFLWLEVCERVKGSGCLLLDCWAQLVCGSCRRLLLYPRGAKHVKCSCCQTVNIVLEADQVGQVKCVSCAVLLMYPYGASQVRCSSCRFVTEIGAHNKRPPWSVQQRKPTPPKAGC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03862 172 SUPERFAMILY Formin homology 2 domain (FH2 domain) 33 69 - -
Pste3g03862 172 PANTHER PROTEIN LSD1 6 167 IPR040319 -
Pste3g03862 172 MobiDBLite consensus disorder prediction 1 15 - -
Pste3g03862 172 MobiDBLite consensus disorder prediction 1 49 - -
Pste3g03862 172 Pfam LSD1 zinc finger 84 108 IPR005735 -
Pste3g03862 172 Pfam LSD1 zinc finger 122 146 IPR005735 -
Pste3g03862 172 MobiDBLite consensus disorder prediction 16 47 - -
Pste3g03862 172 NCBIfam zinc finger domain, LSD1 subclass 81 111 IPR005735 -
Pste3g03862 172 NCBIfam zinc finger domain, LSD1 subclass 119 147 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Pste3g03862 zf-LSD1 1.2e-11 No_clan