Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03844 AGTGAGAGGCAGAGTCGGAAACAAACAATGAAGACGATTCTTTCATCGGAGACGATGAACATTCCGGAGGGAGTGAGCATAAAGATTCATGCGAAGGTGATAGAGGTTGAAGGACCTCGAGGAAAATTGGTGCGAGATTTCAAGCATCTGAACCTTGATTTTCAACTGATTACCGAAGAGGACGGTAAAAGAAAGCTGAAGATCGACGCGTGGTTCGGGTCTCGTAAAACCTCCGCCGCCATTCGCACCGCCCTCAGTCACGTGGAAAATCTAATCACCGGCGTGACCAAGGGATACCGCTACAAGATGAGGTTCGTCTACGCTCACTTCCCCATCAACGCCAGCATCACCAACAGCAACAAGTCAATTGAGATAAGAAATTTCCTCGGGGAGAAAAAGGTCAGGAAAGTGGACATGCTTGATGGCGTTTCCGTTGTGCGATCTGAGAAGGTTAAGGATGAATTGGTTTTGGATGGAAACGACATTGAGCTTGTTTCTAGGTCCTGTGCTCTCATTAACCAGAAATGCCATGTTAAAAATAAGGATATTCGGAAGTTCCTTGATGGGAACCATATTGGAAGAAGAGTAGATGAAAATAGTCACCCTCCTTTTAGCTTGGAGATCCTTTTTGTCAGAATTTGGATTTTACAATTTGTGTTGTCAAACTATTCTTTTTTGGAATTATCACTCCCTATATGCATTGTTGTTGAATATTTGTTAGTT 723 0.4343 SERQSRKQTMKTILSSETMNIPEGVSIKIHAKVIEVEGPRGKLVRDFKHLNLDFQLITEEDGKRKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNFLGEKKVRKVDMLDGVSVVRSEKVKDELVLDGNDIELVSRSCALINQKCHVKNKDIRKFLDGNHIGRRVDENSHPPFSLEILFVRIWILQFVLSNYSFLELSLPICIVVEYLLV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03844 241 Gene3D - 99 199 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 Pfam Ribosomal protein L6 21 98 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 Pfam Ribosomal protein L6 110 189 IPR020040 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 FunFam 60S ribosomal protein L9 10 98 - -
Pste3g03844 241 SUPERFAMILY Ribosomal protein L6 99 190 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 Gene3D - 10 98 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 SUPERFAMILY Ribosomal protein L6 10 98 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 PANTHER 60S/50S RIBOSOMAL PROTEIN L6/L9 10 189 IPR000702 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Pste3g03844 241 FunFam 60S ribosomal protein L9 99 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03844 Pste-Chr3 30821667 30822557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03844 10 195 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 82.888 7.48e-114 322