Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03826 TGGTATCTTAAATTACATATGACAAAAAGAAAGAATGAACAAAATCAGAGGACCTCCTTAGACCTCTCGCGCAAACAGCTCAACTTGTGAAAACACCCAAAATTAAGCTGTCATGAGAGGCAAAAAAAAATTAGCACATTCTCAGCTTATTCCTTTCATTTGTGCAGGATCTGTTCTTACTAGCCTCTTTCTTAGCCCCTAGCAGCTCCATCCCGAAAGGGCTTTGGCCACTAATGACCAGAGATGGTGCTGAATAATAAAAATAATAATAATAATAACACTAAAGAGAAAATAATGGCATATAGTTGAATCGTGTTATCAACATCTTGTGGGTTTTGGCTACCCAATCCTGTGATCACCATTGTGATTGTGATTGTCAATGGTAATGGGCGCGCGCTCTGCTTCGCTGGTGCGCGCACCATCCAATAATGTCGTCAAGTTGAGGTTCAGCCTGGGTAAGGGTGACGTAGTTGTTTTGGTATTGGCATCAATATTAATATCATGTTCGTGCACAGCAGCAAAAGCGATGTCTTCAGATGCTGAGGCGCTGCTTAAGTTCCGGGATTCTCTGAGAAATGCGGTGGCCCTTAGCAGTTGGGACCTATCCATAAACCCAAAGCCACCTTGCTCTGGCAACATTCCGAACTGGATAGGCCTGTTTTGTCTGAATGACAGGGTTTGGGGTTGCGCCTTGAGAACATGGGGCTGACAGGCAACATCGACGTAGTGTCTCTGGGTTCAATCCCCGCTCTGCGCTCGATTAGCCTAATGAATAATACCTTTGTGGGGCCCTTGCCTAACGTCAGGTTGCTGCCAAATCTTAAGGCCCTCTACTTGTCCTATAATCATTTCTCAGGACAGATACCCGATGATGTATTTGCGGGTTTGCATAAATTGAGGAAACTCTATTTGGCCAATAACGAGTTCACAGGTCTAATTCCTTCCTCTCTTGCTACCTTGCCCAGTCTCCTCATCCTCAGGCTCGACTCAAACAAGTTTCAAGGACAAATCCCCCGATTTCAACACAATAATAATTTGAAGATAATCAACTTTGCTAACAACGAGTTAGAGGGTCCCATCCCTGCCAATCTAAGCAACTTCGATGCCTCCTCATTTAGCGGGAACCCAGGACTATGTGGGCTGCCCCTGACGAATGAGTGCGATGCGGCCACTGCAGAGGCGACACTATCCAAACTGCGCCTTCTAAAAATATTACTTGCTGTGATCGCGACAGCATTGATAGTAGCCATCCTGGTTGCAGTGTTAGTGATATGTCGGTTGGGGTCACAGAAGCAACAACCTGCAGATCATGATCATCAGGCCTCAACGTTGGAGGGCCAGAGCCAGAGCCAGAGCCAAACCTCCAACAAATATGCTCCTCCCATTTATGTCAAAACTAAAAGCCTGGCGGATCATTACGATGCTAGTCCTAGGCAGGCGTCATCATCAGATCATGCACATGCACGTTCCAGGAGGGGAGAACAAGGCAAACTGACATTCCTCAGACATGACCAACCCAAATTTGATTTGCAGGATTTGCTAAAGGCATCCGCTGAAATTTTAGGAAGTGCTGGATTTGGGTCTTCCTACAAGGCCGTGATTTTGGACGGTCAAGCTGTGGTTGTCAAGAGGTACAAGCTAATGAACAACGTGCCAAGAGAGGAGTTCCACGAGCACATGAGAAGGCTAGGCAACCTCATCCATCCCAATCTTCTCCCTTTCCTCGCCTATTACTACAGAAAAGAAGAAAAGCTTCTACTCTCTAACTTTGTTGACAACAGGTGCTTGGCCATCCATCTTCATGGTAATCATAACTATCAAAAGCCGGGACTTGATTGGCCAACTCGCTTGAAAATCGTGAAAGGTATAGCCAGGGGTTTGGCTTACCTATACAGTTCACTCCCAAGCGTGATTGTGCCTCATGGTCACCTAAAATCTTCCAACGTGCTTTTGGATGAATCCTTTGAGCCCCTACTCACTGATTATGCCCTCAGTCCCGTCATCAACCTTGATCATGCCCAACAAATCATCATGCCTTACAAATCTCCCGAGTATGCTCAATTGGGTCGCATTACAAAGAAGACTGACGTGTGGAGTTTTGGAATTCTGATACTGGAGATCTTGACCGGCAAATTCCCAGAGAACTATCTCACACTTAGGCATAATCCTGATTCTGACATAGCTAGTTGGGTAAATACCATGATTACTGAGAAGCGCACTAGTGAAGTGTTTGACATAGAAATGGGAGGAATCGGAAATAGTAAAGCTGAATTGCTCAAACTCTTAAAGATTGCCTTGAGTTGTTGTGAGGAGAACGTGGAAAGAAGGCTAGATATCAAAGAAGCTCTTGAGCAAATTGAAGACTTAAAAGAGAGTGAAAATGATGCTATTATTGGAGAATACTCCTCCACCCTCATCACCTCTGAAAGAAATGCTTATAGAGCTGTGTGATTGTCACTCGCTTTTTTTTTTTCCGCCGCTTCACTCCGACTTTATTTGGAACCTACAAATTTGTACGCGTGGAAGGTGGCTTTCCCCATGAAGATTAACATGTGCTATAAATCAATCTTAAATTCTTTTAATTAATTGATTGATTAGCTTTTATGTCTA 2610 0.4444 MGLTGNIDVVSLGSIPALRSISLMNNTFVGPLPNVRLLPNLKALYLSYNHFSGQIPDDVFAGLHKLRKLYLANNEFTGLIPSSLATLPSLLILRLDSNKFQGQIPRFQHNNNLKIINFANNELEGPIPANLSNFDASSFSGNPGLCGLPLTNECDAATAEATLSKLRLLKILLAVIATALIVAILVAVLVICRLGSQKQQPADHDHQASTLEGQSQSQSQTSNKYAPPIYVKTKSLADHYDASPRQASSSDHAHARSRRGEQGKLTFLRHDQPKFDLQDLLKASAEILGSAGFGSSYKAVILDGQAVVVKRYKLMNNVPREEFHEHMRRLGNLIHPNLLPFLAYYYRKEEKLLLSNFVDNRCLAIHLHGNHNYQKPGLDWPTRLKIVKGIARGLAYLYSSLPSVIVPHGHLKSSNVLLDESFEPLLTDYALSPVINLDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNPDSDIASWVNTMITEKRTSEVFDIEMGGIGNSKAELLKLLKIALSCCEENVERRLDIKEALEQIEDLKESENDAIIGEYSSTLITSERNAYRAV 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03826 583 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 9 104 - -
Pste3g03826 583 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 1 560 IPR046959 -
Pste3g03826 583 SMART LRR_typ_2 38 62 IPR003591 -
Pste3g03826 583 SMART LRR_typ_2 87 109 IPR003591 -
Pste3g03826 583 SMART LRR_typ_2 63 86 IPR003591 -
Pste3g03826 583 Coils Coil 582 583 - -
Pste3g03826 583 MobiDBLite consensus disorder prediction 241 260 - -
Pste3g03826 583 Coils Coil 539 559 - -
Pste3g03826 583 Gene3D Ribonuclease Inhibitor 2 162 IPR032675 -
Pste3g03826 583 Pfam Leucine rich repeat 39 100 IPR001611 GO:0005515
Pste3g03826 583 FunFam Pollen receptor-like kinase 1 358 566 - -
Pste3g03826 583 SUPERFAMILY L domain-like 10 172 - -
Pste3g03826 583 SUPERFAMILY Protein kinase-like (PK-like) 286 557 IPR011009 -
Pste3g03826 583 Pfam Protein tyrosine and serine/threonine kinase 286 551 IPR001245 GO:0004672|GO:0006468
Pste3g03826 583 Gene3D Transferase(Phosphotransferase) domain 1 359 575 - -
Pste3g03826 583 ProSiteProfiles Protein kinase domain profile. 282 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03826 583 MobiDBLite consensus disorder prediction 203 224 - -
Pste3g03826 583 Gene3D Phosphorylase Kinase; domain 1 247 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03826 Pste-Chr3 30606274 30609070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03826 3 562 Receptor kinase-like Gene Family AT5G35390 50.000 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste3g03826 Pkinase 5.2e-24 CL0016