Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03824 ATGAGTGGAATTTCATGCGTGGACTTCCCAGAATCAGATACAGACATGTCATTTGTGAGCTCCGAGAGGCCAAGCAGTGGACGTTCATCCTTGGTTTATGAATATTTAGACCCTGGCCGAACTTCACGACTTTCTACTAGTTCAGATCATAGCTTTGGATCAACCCGATTGGGACTCAGGTTCAATGACCCCAATTCACCAGATAGGTCATTCTCGCATGAAAGCAGTATAACATCATATTCATATTCATCACAGAGCATGGATGAAGCAGCAGAAGCTGACATGAGGAGGCTGAAGCTTGAGTTAAAGCAAACCATGGAAATGTACAGTACAGCATGCAGAGAAGCACTAACAGCACAGCAGAAGTTAATGGAGTTGACCAACTGGAGAATTGAGGAAGAAAAAAAATTAGACGAAGCACGATTGGCTCAGGAAGCTGCACTGGCAATTGCAGAGAAAGAGAAAGTAAGATGTAAAGCAGCGATGGAAACTGCTGAAGCATCTAAGAAAATTGCAGAGGTGGAAACACATAGAAGAGCGAGTGTTGAAGTTAAAGCTCTCAAAGAAGCAGAGGAAATGAGGAAGCTATTGGACAATCTAGCCCAAACTGATGTAAGATATAGGAGATACAGTATAGAAGAGATTAAAGCTGCCACAAACTTCTTTTCTGAATCCCTGAAAATTGGGGAAGGAGGTTATGGCCCTGTTTATAAATGTTACCTTGATCACACTCCAGTTGCTGTCAAGGTTTTACGTCCAGATGCTGCTCAAGGGAAGTCACAATTTCAGCAAGAGATTGACATACTGAGCTGCATGCGACACCCAAACATGGTGCTTCTTCTAGGAGCGTGTCCAGAGTATGGCATATTGATTTATGAATATATGGCTAATGGAAGCTTGGAAGATTGTCTCTTTCGAAAAAAGAAGAAGTGTGTTATGTCTTGGCAGTTGAGGTTCCGAATTGCTGCAGAGATAGCGACGGGATTATTATTCCTCCATCAAACCAAGCCTGAACCTTTAGTGCACCGCGATCTGAAACCAGGCAACATTTTGCTAGACCAAAATTATGTGAGTAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCTGCTGTAGCTGAAAATGCAACACAATGTCGCATGACATCAGCAGCTGGAACATTTTGTTACATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGTGTGAAGTCTGATGTTTATTCTCTAGGGATCATTTTTCTTCAATTATTGACAGGAAGGCCTCCAATGGGATTGGCTCACGGTGTTGAAGAGTCTATAGAGAAGGCCACGTTTGTGGAAATGCTGGACCCGTCTGTCACCAACTGGCCTCTTGAACAAGCTTTGTGCCTTGCAAAGATAGCAGTCAAGTGTGCGGAACTCAGACGAAAAGATAGACCAGACCTTGCTAAACTAGTGTTGCCAGAGCTCGATAAATTGAGAGACTTTGCGGAAGAAAACATGACCCTGACCATGCCCTTTTTAAGATGCACTGTCCCTTCACCCTGTCATAGTGAAGCAGCTTCCGGGCAACAGGAGGTAAATATCGAAGAGCAATCATTATTTCGGTTTATTGTAACGGGACAGAAACGATTACCTGATCCAACCAAGAAAACTCGACCTCACTGGGAGGAATATGAAACTTCAACTAGCGGACACAGACATAGGAGTGCTACTAGAGCTGTGGGAGAAGGCATATACCGCATTTTAAGGCACAAAGCTGGGAAAAGAAGCCATACTCATTTGATCTACAAGCTAGAATTTCCGTGTGAAGGTGAAAAGAAGGAACCCCAGGAATCACTGAATATTGAACGCGAGGGCTCATTCATAATACAAATAAAGAACCCGGAATCGGGTGGGTGGGGACTCCAAAACAAACGCAAGGCTATCTTCCCTGCACACTTGCAAGGGCAGCTGGGGCACGTCAAGTTCCGCCCTGATGATCCACCTGACTTTCTCAACTATGAAGGCTGCGAATTCTTGCTCATATCTGCTTCTGACCACGTTGAAGAGGAGTTGGGCCTTGACCTTTTCACAGAT 2061 0.443 MSGISCVDFPESDTDMSFVSSERPSSGRSSLVYEYLDPGRTSRLSTSSDHSFGSTRLGLRFNDPNSPDRSFSHESSITSYSYSSQSMDEAAEADMRRLKLELKQTMEMYSTACREALTAQQKLMELTNWRIEEEKKLDEARLAQEAALAIAEKEKVRCKAAMETAEASKKIAEVETHRRASVEVKALKEAEEMRKLLDNLAQTDVRYRRYSIEEIKAATNFFSESLKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCMRHPNMVLLLGACPEYGILIYEYMANGSLEDCLFRKKKKCVMSWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDQNYVSKISDVGLARLVPAVAENATQCRMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRPPMGLAHGVEESIEKATFVEMLDPSVTNWPLEQALCLAKIAVKCAELRRKDRPDLAKLVLPELDKLRDFAEENMTLTMPFLRCTVPSPCHSEAASGQQEVNIEEQSLFRFIVTGQKRLPDPTKKTRPHWEEYETSTSGHRHRSATRAVGEGIYRILRHKAGKRSHTHLIYKLEFPCEGEKKEPQESLNIEREGSFIIQIKNPESGGWGLQNKRKAIFPAHLQGQLGHVKFRPDDPPDFLNYEGCEFLLISASDHVEEELGLDLFTD 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03824 687 MobiDBLite consensus disorder prediction 14 28 - -
Pste3g03824 687 PANTHER OS02G0152300 PROTEIN 21 506 - -
Pste3g03824 687 SUPERFAMILY Protein kinase-like (PK-like) 205 480 IPR011009 -
Pste3g03824 687 MobiDBLite consensus disorder prediction 40 77 - -
Pste3g03824 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Pste3g03824 687 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 194 294 - -
Pste3g03824 687 Coils Coil 88 108 - -
Pste3g03824 687 Gene3D Phosphorylase Kinase; domain 1 200 294 - -
Pste3g03824 687 SMART serkin_6 222 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03824 687 FunFam U-box domain-containing protein 51 295 494 - -
Pste3g03824 687 MobiDBLite consensus disorder prediction 1 77 - -
Pste3g03824 687 Gene3D Transferase(Phosphotransferase) domain 1 295 499 - -
Pste3g03824 687 ProSiteProfiles Protein kinase domain profile. 222 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03824 687 Pfam Protein kinase domain 224 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03824 687 Coils Coil 148 168 - -
Pste3g03824 687 MobiDBLite consensus disorder prediction 540 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03824 Pste-Chr3 30586186 30595533 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03824 13 495 Receptor kinase-like Gene Family AT1G78940 65.155 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste3g03824 Pkinase 1.3e-42 CL0016