Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03812 CCATATCCATTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCTGCAATCTGCAATCTGCAATCTGCAATCTGCAATCAATGAATAACATGGCTTCCACCTCGCGTGGTTCCACCTCCTCCTCCAACGGCCTTCTCACCGTCACCATTGGCAACACCCACCCTGACAATGATGAATCCGCCACTAACGTCCATGACGACGACGACGACGACTTGCTCGTTGATCCCAACGATCCTTTCGATATCACTCACACAAAAAATGCACCGCCCGAGTCCCTCAAGCGTTGGAGACAAGCAGCTTTCGTGCTCAATGCCTCCAGGCGTTTTAGATATACTCTTGACTTGAGAAAGGAAGAGGAGAAGGAGCAGAAGAAAAGCATGATAAGATCCCACGCACAAGTCATCAGAGCAGCTTTGCTTTTCAGATTGGCTGGTGAACGGGAACTAGTGACAAGTACAGCAGCAGTGCCATCTCCTACTCCAGTTGGTGAGTATACAGTTGGGCTCGAACAACTTGTTTCAATGACTAAGAATCAGAATATTTCTTCTTTACAACAATATGGAGGGGCAAGTCTACTTCAACATATTTTTCTTTATCACCCACCCCTTAGTCGAAGCCAAGTTAAAGGCTTATCAAATTTACTAAAATCAAATCCGCATAAAGGGATTATAGGAGATGATGTTGATCTATTAAAGAGGAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAGGGGAGAAGTTTCTGGAGGTTTCTTTGGGAATCTTGGCAAGACCTGACTCTTATAATATTGATTATAGCAGCTGTGGTGTCCTTGGTACTTGGAATAAAAACAGAGGGCTTGGAAGAAGGTTGGTACGACGGGGGAAGCATTGCTTTCGCTGTCATTAGAGGTGGCAGAACAATACAAATATCGATATTTGATATTGTTGTTGGTGATGTAGTGCCCCTTAAAATAGGAGATCAGGTTCCTGCCGATGGAGTTGTAATCACTGGTCACTCTCTTGCCATTGATGAATCCAGTATGACCGGTGAAAGCAAGATTATTAACAAGGATCAAAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCGGATGGAGTTGGTGCTATGCTGGTAACTGGTGTTGGTATAAATACTGAGTGGGGATTGCTGATGGCTAGTATCTCAGAAGATACTGGAGAAGAGACTCCATTACAGGTTCGTTTAAATGGAGTAGCAACTTTTATTGGCATAGTTGGGCTTACTGTAGCTGTTTGTGTCCTTGCAGTCCTCTTGGGAAGATACTTCTCGGGCCATACAAAAGATTTAGATGGACAAGTACAATTTGTTGCTGGAGAGACTAGTATTAGCGAAACAGTAGATGGGGTCATCAAAATTTTCACCATTGCAGTCAGTATGAATTCTGAATTATGTTTTGAAACATCTTTTGTAATAGTTCTCTCAGCTAAATATAGAGCCATGCAGGTGCGAAGGCTGTCAGCATGTGAAACTATGGGATCTGCTACAACAATTTGCAGTGATAAGACTGGAACTTTGACCTTAAATCAGATGACTGTAGTTGAGGCATATGTTGGGAGGAAGAAACTAAATCCACCAAATGACTCGACAAAATTGCATTCAGAAGTTCTATCTCTGATTAACGAGGGCATTGCACAAAATACAACTGGCAATGTTTTCGTGCCTAAGGATGGTGGAGAGGCGGAGGTGTCAGGATCTCCTACAGAGAAGGCAATTCTTTCTTGGGCAGTGAAGTTGGGGACGAATTTTGATCTTATTAGATCCAATTCAACAATTCTCCACGTCTTCCCCTTCAATTCTGAGAAAAAGAGAGGCGGTGTTGCTGTGAAACTGCTGAACTCTGCAGTACATATACACTGGAAAGGAGCTGCAGAGATAACAATCTTCAAGAAGGCTATTGAAGACATGGCTGCTCAGAGCTTGCGTTGTGTTGCCATCGCATACAGATCGTATGATTTAGACAAAGTTCCATCTAAAGAGGAGGAGTTAGACCAGTGGTCCTTACCAGAACACGAGCTTGTCTTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCCCTGGAGTCAAGGATGCTGTGAAAACATGCACTGAAGCTGGCGTTAAGGTACGCATGGTTACGGGTGACAATCTTCAAACAGCAAAAGCAATAGCTTTGGAGTGTGGAATACTGATGTCAAATGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGACATTCCGTGAACTATCTGAAAAAGAAAGGGAACAAGTTGCCAAAAGAATAACGGTGATGGGGAGGTCTTCTCCTACCGACAAGTTGTTGCTCGTGCAAGCACTTCGAAAAGGTGGCGAAGTTGTTGCTGTCACAGGTGATGGCACCAATGATGCTCCTGCTCTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACAGAAGTTGCAAAAGAAAGTTCAGATATTATAATCCTGGATGATAACTTTGCATCAGTAGTAAAGGTTGTTCGCTGGGGCCGTTCTGTATATGCAAATATTCAGAAATTTATTCAATTCCAGCTTACAGTTAATGTTGCTGCTCTTGTAATAAATGTTGTGGCATCAATATCATCTGGTGATGTTCCTTTAAATGCTGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCTCTGGCATTGGCTACGGAACCGCCAACAGACAACCTTATGCACAGATCACCAGTTGGACGAAGGGAACCTCTTATAACAAATGTCATGTGGAGAAACTTGATCGTACAGGCTCTCTATCAAGTTATTGTTCTTCTCGTTCTTAACTTCGGTGGTGAAAGTATTTTACGTAATCAGGATTCTAAAGCCCATACCTTACAAGTGAAAAATACTTTAATTTTCAATGCCTTTGTGTTTTGCCAAATATTCAACGAGTTCAATGCTCGTAAGCCAGATGAGATGAATGTCTTCCCAGGAGTGACTAAGAACCGTCTCTTTATGGGAATTGTTGGAATGACCTTTGTGCTTCAGATAATCATCATCGAGTTCCTTGGGAAATTCACATCGACAGTAAGGCTTGATTGGAAGCTGTGGCTTGCTTCTCTATGTATTGGGCTTTTCAGCTGGCCTCTTGCGATTGTTGGAAAATTGATTCCAGTTCCCAAAACACCACTGTCCCGATATTTCAGGAGATTGAGGATGTCCAAGTCCCGTGCACCACAG 3246 0.4285 PYPFSLSLSLSLSLSLSLSFCNLQSAICNLQSMNNMASTSRGSTSSSNGLLTVTIGNTHPDNDESATNVHDDDDDDLLVDPNDPFDITHTKNAPPESLKRWRQAAFVLNASRRFRYTLDLRKEEEKEQKKSMIRSHAQVIRAALLFRLAGERELVTSTAAVPSPTPVGEYTVGLEQLVSMTKNQNISSLQQYGGASLLQHIFLYHPPLSRSQVKGLSNLLKSNPHKGIIGDDVDLLKRKNAFGTNTYPRKKGRSFWRFLWESWQDLTLIILIIAAVVSLVLGIKTEGLEEGWYDGGSIAFAVIRGGRTIQISIFDIVVGDVVPLKIGDQVPADGVVITGHSLAIDESSMTGESKIINKDQKAPFLMSGCKVADGVGAMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVCVLAVLLGRYFSGHTKDLDGQVQFVAGETSISETVDGVIKIFTIAVSMNSELCFETSFVIVLSAKYRAMQVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRKKLNPPNDSTKLHSEVLSLINEGIAQNTTGNVFVPKDGGEAEVSGSPTEKAILSWAVKLGTNFDLIRSNSTILHVFPFNSEKKRGGVAVKLLNSAVHIHWKGAAEITIFKKAIEDMAAQSLRCVAIAYRSYDLDKVPSKEEELDQWSLPEHELVLLAIVGIKDPCRPGVKDAVKTCTEAGVKVRMVTGDNLQTAKAIALECGILMSNEDAVEPNIIEGKTFRELSEKEREQVAKRITVMGRSSPTDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVASISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDNLMHRSPVGRREPLITNVMWRNLIVQALYQVIVLLVLNFGGESILRNQDSKAHTLQVKNTLIFNAFVFCQIFNEFNARKPDEMNVFPGVTKNRLFMGIVGMTFVLQIIIIEFLGKFTSTVRLDWKLWLASLCIGLFSWPLAIVGKLIPVPKTPLSRYFRRLRMSKSRAPQ 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03812 1082 FunFam Calcium-transporting ATPase 815 1063 - -
Pste3g03812 1082 Gene3D - 844 1048 - -
Pste3g03812 1082 Gene3D - 95 147 - -
Pste3g03812 1082 Pfam Ca2+-ATPase N terminal autoinhibitory domain 82 125 IPR024750 GO:0005516
Pste3g03812 1082 MobiDBLite consensus disorder prediction 36 74 - -
Pste3g03812 1082 SUPERFAMILY HAD-like 511 903 IPR036412 -
Pste3g03812 1082 FunFam Calcium-transporting ATPase 93 149 - -
Pste3g03812 1082 FunFam Calcium-transporting ATPase 279 397 - -
Pste3g03812 1082 SUPERFAMILY Calcium ATPase, transmembrane domain M 212 1061 IPR023298 -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 822 834 - -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 513 527 - -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 798 817 - -
Pste3g03812 1082 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Pste3g03812 1082 MobiDBLite consensus disorder prediction 36 63 - -
Pste3g03812 1082 FunFam Calcium-transporting ATPase 691 843 - -
Pste3g03812 1082 SFLD Haloacid Dehalogenase 496 850 - -
Pste3g03812 1082 Pfam haloacid dehalogenase-like hydrolase 510 812 - -
Pste3g03812 1082 SUPERFAMILY Calcium ATPase, transduction domain A 300 394 IPR008250 -
Pste3g03812 1082 Pfam E1-E2 ATPase 301 434 - -
Pste3g03812 1082 Gene3D - 378 536 - -
Pste3g03812 1082 SFLD p-type atpase 496 850 IPR044492 -
Pste3g03812 1082 Gene3D - 699 843 IPR023214 -
Pste3g03812 1082 NCBIfam calcium-translocating P-type ATPase, PMCA-type 299 1061 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Pste3g03812 1082 PANTHER CATION TRANSPORTING ATPASE 158 1061 - -
Pste3g03812 1082 Pfam Cation transporting ATPase, C-terminus 883 1059 IPR006068 -
Pste3g03812 1082 Gene3D - 643 698 IPR023299 GO:0000166
Pste3g03812 1082 Pfam Cation transporter/ATPase, N-terminus 213 278 IPR004014 -
Pste3g03812 1082 SMART Cation_ATPase_N_a_2 207 283 IPR004014 -
Pste3g03812 1082 NCBIfam HAD-IC family P-type ATPase 764 878 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03812 1082 ProSitePatterns E1-E2 ATPases phosphorylation site. 515 521 IPR018303 -
Pste3g03812 1082 Gene3D - 299 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03812 Pste-Chr3 30374682 30403632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03812 43 1072 Primary Pumps ATPases AT3G21180 68.464 0.0 1470