Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03809 ATGACTCGTGTTCTTGACCTCTACGGTGTCCACTACATTCGTTATTGTCTCCGAGGCAAAAACAAAAGCTCTTCCCTGTTGCTGTGCTTCACCTGCTGCTACCAAGGACCAAGGCACTGGACATTCGTGCCTCCTCCCATAACCACAACCTGGCTTGCCTCTGATTCCAATCCATGCTCCTCCTGGGTAGGTGTTCAATGTGACCATGCCCACCATGTCGTCTACCTTAACCTCACTGCTTTTGGGATTACTGGTCAATTAGGTCCTCAAATTGCTAACATTACTCTCCTACACTATTTGGACCTTACCGATAACAACCTTCATGGTCAAATACCTAACTCCTTCAATAACTTGCACAACCTCCACTTTCTCAGCCTTTCTCACAATCAGCTTTCTGGTCAAATTCCATATACTCTCACTCAAATCCCTCCACTCCAATTTGTGGATCTGTCACATAACAGTTTAAGTGCTTCAATCCCCTCAAGTATTGGGAACATGACTCACCTTTTACAGTTGTATCTTCAAGTTAACCACTTGTCTGGGACAATTCCCTCTTCCATTGGGAACTGCAGTAAATTACAAGAATTGTTTCTTGATGAAAATCAGTTGGAGGGTACCTTGCCTCAGAGTCTAAACAACCTCAATGATCTTTCTTATTTTGATGTCGCCAACAATAGACTTACGGGTCCAATTCCTTTGGGTTCTGGCACTTGCAAAAATTTAGTGCTTTTGGATCTCTCATTCAACCACTACAGTGGAGGCCTTCCCTCAAGCTTGGGAAACTGTACTGCTTTATCAGAATTTTCTGCCGTCAACTGCAATTTGGTTGGAGATATTCCACCCTCCTTTGGCCTACTGACCAAGCTTTCTATTCTATTCCTTCCTGAGAACCAGTTATCTGGAAAAATACCTCCAGAAATTGGCAACTGTAAGTCTTTAACAAAGTTACATCTGTACTCCAATCGACTTGAGGGAAATATTCCAAATGAACTGGGAAAACTAAGTAAACTGGTGGATCTTGAATTGTTTACTAATCAATTCACAGGTGAAATTCCACTTAGCATCTGGAAGATAAAATGTCTTGAGCATCTCCTTGTGTATAATAATAGTCTTTATGGGGTACTGCCTTTCGAGATGACCCAGCTCAAGCAACTGAAAAATATCTCATTGTTTAACAACCAGTTTTCTGGAGTCATACCGCAAAGCTTGGGAATTAACAGCAGTTTAGTTCAGGTGGACTTCACAAATAATAAATTCACTGGCAACATCCCACCAAATCTGTGTTTTGGCAAGAAGTTAAACATCCTGAATTTGGGCTTCAATCAACTTCAAGGTAGCATACCTCCCGATGTTGGGAGCTGTACAACCCTTGAAAGGTTAATTCTTCAACACAATAATTTTACTGGGTCTCTTCCTTATTTTAAAAGCAATCAGCATCTTGCATATATGGATATCAGCAATAACAAAATCCATGGAGCAATTCCATCAAGTTTGGGAAATTGCAGACATCTCACTGACTTAATTCTGTCCACGAACAAGTTTACAGGACCTATACCCTCCGAGCTTGGGAACCTTGTGAATCTTCGGACTTTGAATCTCGCTCACAACAACTTAGAAGGTCCTTTGTCCTCCCAGCTGTCAAAGTGTATCAAAATGGACAGGTTTGATGTTGGATTCAATTTCCTAAATGGCTCGTTGCCATCAAGTCTGCAGAGCTGGACAGGGCTAACAACATTAATTTTGAGTGAGAATCACTTTAGCGGGGGCCTCCCAGCTTTCTTGTCTGAATTTAAAGAGCTTTCTGAACTACAACTTGGTGGCAATATGTTTGGTGGTAGAATTCCTAGATCCGTTGGAGCATTGGAGAAATTGATCTATGGCCTGAATCTAAGTTCAAATGGGCTTACAGGTGAAATTCCTCTAGAGGTTGGGAACCTGAAAAAGTTGCAAACATTGGATCTATCTCAGAACAATTTGACAGGAAGCATAGAAGTTCTTGGTGAACTCCTCTCCTTACTTGAACTCAATATTTCACACAATTCTTTTCATGGTCTTGTACCAAAGATGCTAATGAAGCTGCTTAATTCTCCCTTGTCATCATTTTTGGGCAATCCTGGCCTATGTATCAGATGTTCAGCGTCAGATGGCTTGGCTTGCACTGAAAGAAGCTCTATAAAATCGTGTGATGATAAATCTACTAAACAGAATGGCCTCAGTAAAGTTGAAGTTGTGCTGATTGCTCTTGGGTCTTCAATATTTTTTGTTTTGCTGTTGCTGGGATTAGTTTGCATTTTTGTTTTTGGCAGAAAAGCTAAGCAGGAAATCCATATCTCTGCTGAAGAGGGTTCTTCATCCCTTCTTAAAAAAGTCATGGAGGCTACAGAAAACCTAAATGACCAATATATTATCGGCAGAGGAGCCCATGGAGTTGTTTATAAAGCCCAGATAGGTCCAGACAAAGCTTTCGCTGTGAAGAAGATAGGATTTGCAACAAGCAAAGGTAAGAACTTGAGTATGATCAGAGAAACTGAAACCCTTGGAAAAATTAGACATCGAAATCTGGTCAAATTGGAAGACTTTTGGCTGAGAAAAGATTATGGTATAATTTTGTACAGCTACATGCCAAATGGAAGTCTTGATGATGTTTTGCACAAAAAGAAACCATCACCAACCTTAGAGTGGAATGTCCGGTATAAGATAGCTGTTGGAATTGCTCATGGATTGGCTTATCTCCATTATGACTGTGATCCTCCAATAGTGCACCGAGACATCAAGCCGAGCAATATACTTCTAGACTCTGATATGGAGCCTCACATTGCTGACTTTGGTATTGCCAAACTTCTGGATCAGTCTTGTGCTTCAAATCCTTCCGTTTCTGTGCCGGGTACTATTGGTTATATTGCACCAGAGAATGCTTATACAACAGCAAATAGTAGGGAGTCTGATGTATACAGTTACGGGGTAGTTTTGCTTGAGCTGATAACCGGAAAGAAGGCATCAGATCCTTCGTATATGGAGGGTACCATTTTAGTGGATTGGGTTAGGTATGTGTGGAGGGAAACAAGAGAAATTAATCAAATTGTTGATTCAAGCCTCGAAGATGAATTTCTAGATACCCATATAATGGAAAATGTTACCAAAGTGCTTGTGGTTGCTTTGAGGTGTAGTGAGAAGGATCCACACAAGAGACCCACAATGAGAGAAGTTATCAATCAATTATCAGATGCTAATCCACGTACAATAAGTAAAAAGGGCAATCTATGA 3264 0.4084 MTRVLDLYGVHYIRYCLRGKNKSSSLLLCFTCCYQGPRHWTFVPPPITTTWLASDSNPCSSWVGVQCDHAHHVVYLNLTAFGITGQLGPQIANITLLHYLDLTDNNLHGQIPNSFNNLHNLHFLSLSHNQLSGQIPYTLTQIPPLQFVDLSHNSLSASIPSSIGNMTHLLQLYLQVNHLSGTIPSSIGNCSKLQELFLDENQLEGTLPQSLNNLNDLSYFDVANNRLTGPIPLGSGTCKNLVLLDLSFNHYSGGLPSSLGNCTALSEFSAVNCNLVGDIPPSFGLLTKLSILFLPENQLSGKIPPEIGNCKSLTKLHLYSNRLEGNIPNELGKLSKLVDLELFTNQFTGEIPLSIWKIKCLEHLLVYNNSLYGVLPFEMTQLKQLKNISLFNNQFSGVIPQSLGINSSLVQVDFTNNKFTGNIPPNLCFGKKLNILNLGFNQLQGSIPPDVGSCTTLERLILQHNNFTGSLPYFKSNQHLAYMDISNNKIHGAIPSSLGNCRHLTDLILSTNKFTGPIPSELGNLVNLRTLNLAHNNLEGPLSSQLSKCIKMDRFDVGFNFLNGSLPSSLQSWTGLTTLILSENHFSGGLPAFLSEFKELSELQLGGNMFGGRIPRSVGALEKLIYGLNLSSNGLTGEIPLEVGNLKKLQTLDLSQNNLTGSIEVLGELLSLLELNISHNSFHGLVPKMLMKLLNSPLSSFLGNPGLCIRCSASDGLACTERSSIKSCDDKSTKQNGLSKVEVVLIALGSSIFFVLLLLGLVCIFVFGRKAKQEIHISAEEGSSSLLKKVMEATENLNDQYIIGRGAHGVVYKAQIGPDKAFAVKKIGFATSKGKNLSMIRETETLGKIRHRNLVKLEDFWLRKDYGIILYSYMPNGSLDDVLHKKKPSPTLEWNVRYKIAVGIAHGLAYLHYDCDPPIVHRDIKPSNILLDSDMEPHIADFGIAKLLDQSCASNPSVSVPGTIGYIAPENAYTTANSRESDVYSYGVVLLELITGKKASDPSYMEGTILVDWVRYVWRETREINQIVDSSLEDEFLDTHIMENVTKVLVVALRCSEKDPHKRPTMREVINQLSDANPRTISKKGNL 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03809 1087 Pfam Leucine rich repeat 479 538 IPR001611 GO:0005515
Pste3g03809 1087 Pfam Leucine rich repeat 97 155 IPR001611 GO:0005515
Pste3g03809 1087 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 236 327 - -
Pste3g03809 1087 SMART serkin_6 797 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03809 1087 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 765 873 - -
Pste3g03809 1087 PRINTS Leucine-rich repeat signature 646 659 - -
Pste3g03809 1087 PRINTS Leucine-rich repeat signature 145 158 - -
Pste3g03809 1087 SMART LRR_typ_2 525 549 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 431 454 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 646 668 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 286 310 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 669 692 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 118 149 IPR003591 -
Pste3g03809 1087 SMART LRR_typ_2 166 190 IPR003591 -
Pste3g03809 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Pste3g03809 1087 FunFam Leucine-rich repeat receptor-like kinase 40 139 - -
Pste3g03809 1087 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 329 427 - -
Pste3g03809 1087 Gene3D Ribonuclease Inhibitor 361 714 IPR032675 -
Pste3g03809 1087 Gene3D Phosphorylase Kinase; domain 1 767 873 - -
Pste3g03809 1087 Gene3D Transferase(Phosphotransferase) domain 1 874 1085 - -
Pste3g03809 1087 ProSitePatterns Protein kinases ATP-binding region signature. 803 826 IPR017441 GO:0005524
Pste3g03809 1087 ProSiteProfiles Leucine-rich repeat profile. 648 670 IPR001611 GO:0005515
Pste3g03809 1087 Gene3D Ribonuclease Inhibitor 39 141 IPR032675 -
Pste3g03809 1087 SUPERFAMILY L domain-like 56 395 - -
Pste3g03809 1087 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 479 1074 - -
Pste3g03809 1087 Gene3D Ribonuclease Inhibitor 236 360 IPR032675 -
Pste3g03809 1087 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 140 235 - -
Pste3g03809 1087 Gene3D Ribonuclease Inhibitor 142 235 IPR032675 -
Pste3g03809 1087 SUPERFAMILY Protein kinase-like (PK-like) 784 1073 IPR011009 -
Pste3g03809 1087 SUPERFAMILY L domain-like 382 713 - -
Pste3g03809 1087 Pfam Protein kinase domain 801 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03809 1087 FunFam Serine/threonine-protein kinase-like protein CCR4 874 1086 - -
Pste3g03809 1087 ProSiteProfiles Protein kinase domain profile. 797 1080 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03809 1087 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 431 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03809 Pste-Chr3 30328492 30331952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03809 43 1076 Receptor kinase-like Gene Family AT1G73080 51.776 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste3g03809 Pkinase 4.6e-45 CL0016