Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03796 ACACCACCCTTCTCATTCTTTACTCGCTGATAAGGCTGCTCTTCTGGAATTCAGAAGAACAATGATATCTGACCCCCATTCCTCACTTGCTAACTGGAATGAAGCTGTTCACGTGTGCAACTTCACGGGTGTTGAATGTGACAAATTCCATAACCGTGTTATAAGACTAATCCTATATGATAAAGTTATGGTGGGGCAGCTTTCACCCGTTCTTTCCAATCTTACTGGACTGCACGACCTACAAATTGTTGGCAGCCACTTATTTGGCATTATTCCTCCTGAATTTTCCACCCTCAAGCGCCTTCACATCATCAATCTTGAGGGGAATAATTTGCATGGCTCAATACCGGAGTCATTTTCCAAGCTTTCTAAACTTAACATTTTTGTCATTAAGGAAAATAATATATCTGGTTCACTTCCTCCATCTCTCTTTTCCAACTGCTCTCTGCTAGACATTGTGGACTTCTCCAGCAACTCGTTAACTGGTCAAATCCCAAAAGAGATTGGAAACTGCCAAAACCTGTGGAGTATAAGTTTATACAATAATCAATTTACAGGCCAACTTCCTGTCTCTCTCACCAATCTATCGCTTCAAAATTTAGACTTGGAGTACAATTATCTATGTGGGGAATTGCCCACAAAGTTTTTAAGCAGCTGGCCATATCTCCTTTACCTTCATTTATCATACAACAAGATGGTAAGCCATGATAACAACACCAATCTTGATCCATTTTTCACTGCTCTCAGAAACAACAGTAATTTAGAGGAGCTTGAATTGGCAGGAATGGGCCTTGGGGGAAGGTTCACCAATACTGTCGCCAGCCAACTCACCAGTCTAAGAACCCTGCTCCTGCAGGAAAACCAAATTTTTGGATCAATTCCTGGCAGCTTAGCCTACCTTTCCAGGCTTTTCATTCTTAATTTAACATCCAATCTTCTAAATGGCACTATATCCTCTGATATCTTCAGATTACCAAAGTTGGAGCAACTTTTCTTATCCCACAACCTTTTCAGAACTCCAATTCCAGAAGCAATAGGCAAGTGTCTTAATCTCGGTTTGTTGGATTTGTCACACAATCAATTCTCAGGTAGAATTCCAGACAGTTTGGGAAATTTGGTTAGACTAAACTCTTTGTTTCTCAACAATAACCTTCTCTCAGGAACGGTACCTCCCACATTAGGAAGGTGCACTAATCTGTACAGGCTTGACCTGTCCCATAATAGATTAACAGGAAACATCCCACTCGAACTGGCAGGCTTGCATGAGATCAGGATTTTCTTAAATGTCTCTCATAACCACCTTGAAGGACCCCTGCCAATTGAGCTCAGCAAATTAGAGAAGGTTCAAGAAATAGATCTTTCATCCAATCACCTGACTGGAAGTATCTTCCCTCAGATGGCAGGATGTATTGCTGTTTCAATGATTAATTTTTCGAACAATTTTCTTCAAGGTGAACTCCCACAATCCCTAGGTGATCTGAAAAACCTTGAATCTTTGGATGTTTCAAGAAACCAATTAGCTGGACTGATACCAGAAACACTTGGTAAAATTGACACACTCACTTTTCTCAATTTATCATTTAACAATCTGGAAGGAAAAATTCCATCTGGCGGTATCTTTAATTCAGTTTTAAACTTGTCATTCTTAGGAAATCCACAACTTTGTGGGATAGTTGCAGGCATACCCTTGTGCTCTCAAAGGAAAAAATGGTTTCACAGGCGTTTGTTATTGATTATATTAATTTTGGTCATCTTCCTATCAACATTATTGTCAATAATTTGTTGTGTAATTGGATGCAAGCGTCTTAAAATAATCATCAGCTCTCAAAGGACCAAGGCAAGCAAAAATGCAACTAAACTTGAGCTGATCAGTAACTTTCCAAGAATTACGCATAAGGAACTATCAGATGCAACCGGAGGATTCGACAATCAGAGACTAGTTGGATCTGGTGGTTATGGACATGTCTATAGGGGTGTTCTAATGGATGGCACACCAATAGCTGTCAAGGTGCTGCATTTGCAATCTGGAAATTCTACCAAGAGCTTTAACAGAGAATGTCAAGTTCTGAAGAGAATTAGACACAGAAATCTAATAAGAATTATCACAGCATGCAGCCTACCTGATTTTAAGGCTCTTGTTCTACCTTACATGGCTAATGGGAGCTTGGAGAGCCGTCTCTATCCTTCTAGTGGAACATCAGACTTGAGTATTGTCCAGAGGGCGAATATTTGCAGTGATATAGCTGAAGGGATGGCCTATTTGCATCACCATTCTCCTGTCAGAGTCATACACGGCGATCTAAAACCAAGCAATATTCTTCTCAATGATGACATGACAGCTCTCGTTTCTGATTTTGGGGTCGCAAGGCTAATTATGAGTGTTGGAGGTGGGGCTATTGATAACATGGGCAATTCTACTGCAAATTTGTTCTGCGGATCCATTGGATACATTGCACCAGAATATGGATTTGGATCCAATACATCTACCAAAGGAGATGTCTATAGCTTTGGCATTCTAGTTCTTGAGATGGTGACTAGAAGAAGACCTACAGATGACATGTTTGTTGGTGGGTTAAGTCTGCAAAGATGGGTAAAGATTCATTTTCATGGAAGGCTAGAAAAGGTGGTAGATCCTGCTTTGGTGACTGCCTTGAGAGATCAATCCCGAGAGGTTGGAAAGATGTGGGAAGTAGCTATTCTGGAGTTAATTGAGTTGGGGCTTCTTTGCACACAGGAGTCACCTTCGATGAGACCAACCATGCTTGATGCTGCAGATGACTTAGATCGTCTAAAGAGATATCTTAGTGGGGACACAACAGGCACTTTTGCTTCATCTCTAGGAATTTCATCTTCCACTGTAGGTGGTGACTGG 2872 0.4084 MISDPHSSLANWNEAVHVCNFTGVECDKFHNRVIRLILYDKVMVGQLSPVLSNLTGLHDLQIVGSHLFGIIPPEFSTLKRLHIINLEGNNLHGSIPESFSKLSKLNIFVIKENNISGSLPPSLFSNCSLLDIVDFSSNSLTGQIPKEIGNCQNLWSISLYNNQFTGQLPVSLTNLSLQNLDLEYNYLCGELPTKFLSSWPYLLYLHLSYNKMVSHDNNTNLDPFFTALRNNSNLEELELAGMGLGGRFTNTVASQLTSLRTLLLQENQIFGSIPGSLAYLSRLFILNLTSNLLNGTISSDIFRLPKLEQLFLSHNLFRTPIPEAIGKCLNLGLLDLSHNQFSGRIPDSLGNLVRLNSLFLNNNLLSGTVPPTLGRCTNLYRLDLSHNRLTGNIPLELAGLHEIRIFLNVSHNHLEGPLPIELSKLEKVQEIDLSSNHLTGSIFPQMAGCIAVSMINFSNNFLQGELPQSLGDLKNLESLDVSRNQLAGLIPETLGKIDTLTFLNLSFNNLEGKIPSGGIFNSVLNLSFLGNPQLCGIVAGIPLCSQRKKWFHRRLLLIILILVIFLSTLLSIICCVIGCKRLKIIISSQRTKASKNATKLELISNFPRITHKELSDATGGFDNQRLVGSGGYGHVYRGVLMDGTPIAVKVLHLQSGNSTKSFNRECQVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLESRLYPSSGTSDLSIVQRANICSDIAEGMAYLHHHSPVRVIHGDLKPSNILLNDDMTALVSDFGVARLIMSVGGGAIDNMGNSTANLFCGSIGYIAPEYGFGSNTSTKGDVYSFGILVLEMVTRRRPTDDMFVGGLSLQRWVKIHFHGRLEKVVDPALVTALRDQSREVGKMWEVAILELIELGLLCTQESPSMRPTMLDAADDLDRLKRYLSGDTTGTFASSLGISSSTVGGDW 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03796 937 CDD STKc_IRAK 627 910 - -
Pste3g03796 937 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 697 919 - -
Pste3g03796 937 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Pste3g03796 937 SUPERFAMILY L domain-like 251 537 - -
Pste3g03796 937 FunFam LRR receptor-like serine/threonine-protein kinase EFR 247 550 - -
Pste3g03796 937 SUPERFAMILY Protein kinase-like (PK-like) 599 907 IPR011009 -
Pste3g03796 937 Gene3D Ribonuclease Inhibitor 105 177 IPR032675 -
Pste3g03796 937 Gene3D Ribonuclease Inhibitor 1 104 IPR032675 -
Pste3g03796 937 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 122 324 - -
Pste3g03796 937 Pfam Leucine rich repeat N-terminal domain 2 27 IPR013210 -
Pste3g03796 937 SMART serkin_6 621 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03796 937 Gene3D Transferase(Phosphotransferase) domain 1 697 920 - -
Pste3g03796 937 SMART LRR_typ_2 473 496 IPR003591 -
Pste3g03796 937 SMART LRR_typ_2 78 101 IPR003591 -
Pste3g03796 937 SMART LRR_typ_2 102 126 IPR003591 -
Pste3g03796 937 SMART LRR_typ_2 352 376 IPR003591 -
Pste3g03796 937 SMART LRR_typ_2 256 280 IPR003591 -
Pste3g03796 937 SMART LRR_typ_2 304 328 IPR003591 -
Pste3g03796 937 ProSiteProfiles Protein kinase domain profile. 621 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03796 937 PRINTS Leucine-rich repeat signature 379 392 - -
Pste3g03796 937 PRINTS Leucine-rich repeat signature 473 486 - -
Pste3g03796 937 SUPERFAMILY RNI-like 35 318 - -
Pste3g03796 937 Pfam Protein kinase domain 622 831 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03796 937 Gene3D Ribonuclease Inhibitor 178 551 IPR032675 -
Pste3g03796 937 Pfam Leucine rich repeat 258 316 IPR001611 GO:0005515
Pste3g03796 937 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 2 220 - -
Pste3g03796 937 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 601 696 - -
Pste3g03796 937 Gene3D Phosphorylase Kinase; domain 1 602 696 - -
Pste3g03796 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03796 Pste-Chr3 30202668 30206817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03796 4 897 Receptor kinase-like Gene Family AT3G47570 34.619 5.34e-156 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste3g03796 Pkinase 1.4e-40 CL0016