Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03790 CCCTTCCCTCCCACAAGTCCCACCAAAACTGAGGCTCTTTTCCTAGCACTTACCATATCAGCTTGTGTTGTTATTTTCTGCTCAATCCTCTACTTCCTCTACCATCTATGGCATTCTCTTGTTCACAGAGCTAAGACCATCCCCTTTGATGCAAGTGCTCCCTTGAAGCTCCAAAGATTCTCATACAAAGATTTAAAGCAAGCGACCAATGGCTTTGACACTGCCAATGTAATTGGCAAAGGTGGCTCTGGCACTGTTTTCAGAGGAATACTTAAGGACGGCAAATTGATTGCCATCAAGCGCCTGGATGCGTTGTCTTTGCAGTCTGAGAGAGAGTTTCAAAACGAGCTGCAGATTCTTGGAGGGTTAAGGTCACCATTGTTGGTGACCCTTTTGGGTTACTGTGTGGAAAAGAACAAGAGAGTGTTGGTGTATGAATATATGCCCAACAGAAGCTTGCAGGAGTCCCTCTTTGGAGATGGGGGTCTGACGTTGACTTGGGATAGCAGGTTTCGCATAATATTGGATGTTGCTAGAGCTTTGGAGTTCTTGCACATTGGATGTGATCCTCCAGTGATCCATGGTGACATCAAGCCAAGCAATGTTCTGCTCGACGCTGAGTGGCGTGGGAAGATCTCTGATTTTGGCTTGTCAAGGATTAAGGTGGAGGGCGAAAGAGGCTGGAGGAAGAAAAACACTCGTTCCATTGGAAGTGACATGTGGAGTGGAGATCTTTTCAGCCGCGAGCTCAGCAGCACAACTAGCATGAGGGGGACACTTTGTTATGTGGCACCAGAATATGGAGGGTGTGGGTTCTTGATGGAAAAAGCTGATATTTATAGTTTTGGAGTTTTGATTCTTGTAATTGTGTCTGGTAGGAGACCATTACATGTTCTTGCATCACCCATGAAGCTAGAGAAAGCTAACTTAATAAGCTGGTGTAGACACTTGGCTCAAGCTGGTAACATTTTAGAGCTAGTGGATGAAAGATTGAAGGAAGATTACTACAAAGACCAAGCAAGCCTGTGTATCAACTTGGCACTAACTTGCTTACAGAAAATTCCAGAGTTGCGGCCAGATATTGGGGATATTGTTAAGATTTTGAAGGGGGAGATGGAGCTTCCACCACTTCCATTTGAATTCTCCCCTTCTCCACCTTCTAAATTATACAGCAAATCGAGGAGAAAACCGAAGGGCACTGCAGAA 1206 0.4511 PFPPTSPTKTEALFLALTISACVVIFCSILYFLYHLWHSLVHRAKTIPFDASAPLKLQRFSYKDLKQATNGFDTANVIGKGGSGTVFRGILKDGKLIAIKRLDALSLQSEREFQNELQILGGLRSPLLVTLLGYCVEKNKRVLVYEYMPNRSLQESLFGDGGLTLTWDSRFRIILDVARALEFLHIGCDPPVIHGDIKPSNVLLDAEWRGKISDFGLSRIKVEGERGWRKKNTRSIGSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGFLMEKADIYSFGVLILVIVSGRRPLHVLASPMKLEKANLISWCRHLAQAGNILELVDERLKEDYYKDQASLCINLALTCLQKIPELRPDIGDIVKILKGEMELPPLPFEFSPSPPSKLYSKSRRKPKGTAE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03790 402 SUPERFAMILY Protein kinase-like (PK-like) 50 368 IPR011009 -
Pste3g03790 402 CDD STKc_IRAK 78 370 - -
Pste3g03790 402 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
Pste3g03790 402 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Pste3g03790 402 FunFam Receptor-like serine/threonine-protein kinase At4g25390 225 374 - -
Pste3g03790 402 Gene3D Transferase(Phosphotransferase) domain 1 148 374 - -
Pste3g03790 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pste3g03790 402 SMART serkin_6 72 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03790 402 PANTHER OS07G0586332 PROTEIN 231 396 IPR044576 -
Pste3g03790 402 ProSiteProfiles Protein kinase domain profile. 72 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03790 402 MobiDBLite consensus disorder prediction 378 402 - -
Pste3g03790 402 FunFam Receptor-like serine/threonine-protein kinase At4g25390 41 147 - -
Pste3g03790 402 Pfam Protein kinase domain 74 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03790 Pste-Chr3 30150040 30152151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03790 9 368 Receptor kinase-like Gene Family AT3G58690 35.000 4.65e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste3g03790 Pkinase 1.4e-38 CL0016