Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03783 TAAGGATTAGCTCATTGATGTATCTAAATTTATATGCAGGCAATATCTTCTGCTGATATGATTGTTGTAATGGACAAGGGACACATAAAGTGGATGGGAAATTCAGCTGACTTTCCAATTTTTTCATATACAAAATTTTCTCCATTGAATGAACTTGATTCCGCATTACAGAATCATAGACAACCTTGCTGCACAAATCTTTCTTCCAAATCCAAGGAGCAGTCTGTTCCTGATATGGCAATTGTTCATGACCTGGAGGGAGCAGATGAGATAGTTGAAGTTGAGCTGAGGAAAGAGGGAAAAGTTGAACTTGGAGTGTATAAGAATTATGCTGTCTTCACTGGTTGGTTCATGACTGTCATTATATGCCTATCTGCTATTCTGATGCAAGCTTCTCGTAATGGGAATGATTTATGGTTGTCATATTGGGTTGATACAACAACAGAAAGCAGTCAAGCAAGATACTCTGTGTCTTTCTATCTGTTTGAATCTGCTGAAAAGAAAGATACAAGTTGCATCCCCCACTTTCACCCTGCTATACTATGTCTCTTTTGTATTATGAATTCCTTTTTCACGTTGGTAAGGGCATTCTCTTTTGCATTTGGTGGATTACAAGCAGCAAATAAGGTACACAATAAATTGCTCAACAAACTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGGAGAATATTAAACAGGTTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCTTTCATTGTGAACATTCTCCTGGCTAATTTTGTAGGCTTGTTGGGTATTACAATAATTTTGTGTTATGTGCAGGTCTTCTTCTTACTCTTGCTATTGCCATTTTGGTATATCTACAGTAGACTGCAGTTCTTCTACAGGTCAACATCAAGAGAATTACGAAGATTGGACAGTGTTTCTCGTTCTCCAATATACACATCTTTCACCGAAACACTAGATGGATCCTCAACTATTAGGGCATTCAAATCTGTGAGCGTAGCAGTTACAGGTGTGGAAGATCACCGAATGACCTTCATTTCCTACTATCATGATTTAAAAGCTATTGTAGTTATACAAATGGAAGCAGCAACCATAGTTTGGATCATGTGGTCTGAAAGGATTTTGTACTATGTTGAAGAACTTTTCTGGACAAGGGTGTTTATGGAAATACCTAAAGCACTGTCAACTGAACCTCCTTCAGAAGTGCTTGTTCTACAGGCATTAGTTGCTTGTCATACTTTTGAGTTGGTGCAACTAGTTAACTATAATACAATGGACTTTTTCTTTGCCAAATTCATTGGACATATAACCTTATATCAGAAGACTTCCTACACCGAGATAGTGGCAAGTTTGTGGCTTTCCTTGCGTCTTCAGTTATTAGCTGCGTTTATCATCTCATTCATAGCTGTCATGGCTGTTGTTGGATCTCATGGCAATCTGCCCATCAACTTTGGTACCCCAGGACTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATTGTGTCTCTGTTGGGGAGTTTTTTGTCAAGCTTCTCCGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGCCCTGCAATACATGGACATTCCTCAAGAAGAACAAACTGGATGCCTATACTTGAGTCCAGATTGGCCATGTCAAGGAGTTATCGAATTCCAGTCTGTTACTTTGAAATATATGCCATCTTTGCCAGCTGCACTCTGCAATCTTAGTTTTAGAATTGCAGGAGGGACACAACTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACTCCAATATGTACAGGCTCTATCACAGTTGATGGCATGGATATTCAAAATATTCCTGTCAGGGAACTGCGTAAACATTTGGCTATTGTTCCTCAGAGTCCATTTTTGTTCGAAGGATCATTAAGGGATAACCTAGATCCATTGAAAATGAATGATGACTTAAAAATTTGGAGTGCATTGGCAAAGTGCCATGTGAAAGAAGAAGTAGAAATAGCTGGAGGACTAGATGTTCTTATAAAGGAAGCCGGGATGTCATTTTCAGTTGGCCAGCGGCAGCTTCTTTGCCTCGCACGGGCGATTCTGAAATCATCAAAGGTTCTCTGTTTGGATGAATGCACGGCCAATGTAGACATTCAAACTGCTTCACTGCTGCAAAATACCATTTCCAGTGAATGCGAAGGAATGACAGTGCTCACAATAGCTCACCGGATTTCAACTGTTATAAATATGGACAGCATTCTGATTCTTGACCATGGGAAGCTG 2292 0.397 MQAISSADMIVVMDKGHIKWMGNSADFPIFSYTKFSPLNELDSALQNHRQPCCTNLSSKSKEQSVPDMAIVHDLEGADEIVEVELRKEGKVELGVYKNYAVFTGWFMTVIICLSAILMQASRNGNDLWLSYWVDTTTESSQARYSVSFYLFESAEKKDTSCIPHFHPAILCLFCIMNSFFTLVRAFSFAFGGLQAANKVHNKLLNKLINAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIVNILLANFVGLLGITIILCYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSVSVAVTGVEDHRMTFISYYHDLKAIVVIQMEAATIVWIMWSERILYYVEELFWTRVFMEIPKALSTEPPSEVLVLQALVACHTFELVQLVNYNTMDFFFAKFIGHITLYQKTSYTEIVASLWLSLRLQLLAAFIISFIAVMAVVGSHGNLPINFGTPGLVGLALSYAAPIVSLLGSFLSSFSETEKEMVSVERALQYMDIPQEEQTGCLYLSPDWPCQGVIEFQSVTLKYMPSLPAALCNLSFRIAGGTQLGIIGRTGAGKSSVLNALFRLTPICTGSITVDGMDIQNIPVRELRKHLAIVPQSPFLFEGSLRDNLDPLKMNDDLKIWSALAKCHVKEEVEIAGGLDVLIKEAGMSFSVGQRQLLCLARAILKSSKVLCLDECTANVDIQTASLLQNTISSECEGMTVLTIAHRISTVINMDSILILDHGKL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03783 753 SUPERFAMILY ABC transporter transmembrane region 103 327 IPR036640 GO:0005524|GO:0016020
Pste3g03783 753 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 109 319 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste3g03783 753 CDD ABC_6TM_MRP7_D2_like 108 519 - -
Pste3g03783 753 Gene3D ABC transporter type 1, transmembrane domain 408 526 IPR036640 GO:0005524|GO:0016020
Pste3g03783 753 Gene3D ABC transporter type 1, transmembrane domain 77 350 IPR036640 GO:0005524|GO:0016020
Pste3g03783 753 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 542 753 IPR003439 GO:0005524
Pste3g03783 753 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 412 752 - -
Pste3g03783 753 Pfam ABC transporter 560 706 IPR003439 GO:0005524
Pste3g03783 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 535 752 IPR027417 -
Pste3g03783 753 Gene3D - 529 753 IPR027417 -
Pste3g03783 753 SUPERFAMILY ABC transporter transmembrane region 413 524 IPR036640 GO:0005524|GO:0016020
Pste3g03783 753 SMART AAA_5 568 752 IPR003593 GO:0016887
Pste3g03783 753 FunFam ATP-binding cassette (ABC) transporter, putative 529 753 - -
Pste3g03783 753 ProSitePatterns ABC transporters family signature. 678 692 IPR017871 GO:0005524|GO:0016887
Pste3g03783 753 CDD ABCC_MRP_domain2 540 753 - -
Pste3g03783 753 Pfam ABC transporter transmembrane region 109 323 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03783 Pste-Chr3 30089109 30094374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03783 532 753 Calmodulin-binding Proteins AT2G36910 30.638 1.08e-30 127