Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03779 GGCTTGCCATTCATGGATTATTCATCATGGATTAGCACTTCCTTGGATCTTAACATTAATCCTCAAAGGGTTCATGAACAAGTTCCCAAAAAGGAGGTGGAAAGCAATATTTTGGCATTAGGGGTGAAGAAATGTTGTGTAAATGTAAAAGAAGAGGCTGCATTTCAGTCTGAGGGGGCTTTGGTGGAGGAGCTGAAGCGGGTTAGTGCAGAAAACAAGAAGTTGACAGAAATGCTCACAGAGATGTGTGAGAATTACAACGCTTTGCGAAGCAATTTGGTCGAATATATGAGGAAAAATCCTGATAAGGAGCTAAGCTCTTCAAAGAAAAGGAAGTCTGAAGGCAGCAACAACGATAGTATTCCAATGGGAGTCTCTGAAAGCAGCTCAACCGATGAAGAGTCATGCAAGAAACCAAAAATTTCAAGGGCTTATGTGAGGACAGAACCATCTGATACAAGCCTCATTGTGAAAGATGGATATCAATGGAGGAAATACGGACAAAAGGTTACTAGGGATAACCCTTCTCCAAGAGCCTACTTCAAGTGCTCTTTTGCTCCGAGCTGCCTGGTCAAAAAAAAGGTGCAAAGAAGTGTGGATGATCAATCTGTTCTGGTAGCAACATATGAAGGAGAGCACAATCATCCCCAGCCTTCTCAAATGGAGGTAACAACAGGCTCCAACCGTTGTATGACCCTTGACTTGACAAAATCCAAGTCCACCACCCACTCTAAGAATATAAATCCCAAAATCGAATCACCGCAAGTCCCGCAGGTTTTGGTAGAACAGATGGCTTCTTCCTTGACCAAGGATCCTAATTTCAGAGCAGCACTGGTTGCCGCCATCTCAGGAAAAATGTTGCATAATAATTAAGTACCAAATTTTTGTGAACTATTCTTAACTCATTGTTAAGTATTCTATAAGTGGTTCTTGTCTGGAGCACAGGATCTCTATGTATATATCATTGTCACATATTCCTCAATTTAATCTATCCTTGCTCCACTGATCAGGATTCACGATAGCAGGTCTTGCTCATTATGCATTTGCTAATCTAGCTCAGCTCACTCTTCTCCATTCTTCTCTGATCCTGTTAGAGTAAATTAGCTAGGATACTTCAAATCATGTTTCCAATGAAGTTATTGCAAATTTGGCCTTCAAAAGCAAAGAAAATTTTGGCTTCCAGAGATGCGACTCTATTGACAATACAATATCTCCTTTTCATTTTACAACTCTCTATATGGAACACTGCTCCCATTTTATATCATAAGATTAATAACAGGAACGCAACCATTGCAAGTTCTCAAGCTGTTTAATCATTATACAGATGCACACTCCTAGTCTGAGAATTTTCACTTGACAATATTCTACTTTAATCCCTAGTATCGGAAGTTCAGGAAAATATCTATAAATCAAACAATCAAACTAGGAGGGAAAAAATGAGCTGTT 1446 0.3963 GLPFMDYSSWISTSLDLNINPQRVHEQVPKKEVESNILALGVKKCCVNVKEEAAFQSEGALVEELKRVSAENKKLTEMLTEMCENYNALRSNLVEYMRKNPDKELSSSKKRKSEGSNNDSIPMGVSESSSTDEESCKKPKISRAYVRTEPSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCLVKKKVQRSVDDQSVLVATYEGEHNHPQPSQMEVTTGSNRCMTLDLTKSKSTTHSKNINPKIESPQVPQVLVEQMASSLTKDPNFRAALVAAISGKMLHNN 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03779 290 SMART WRKY_cls 157 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03779 290 SUPERFAMILY WRKY DNA-binding domain 154 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03779 290 MobiDBLite consensus disorder prediction 101 116 - -
Pste3g03779 290 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 58 286 IPR044810 GO:0003700
Pste3g03779 290 FunFam WRKY transcription factor 40 142 219 - -
Pste3g03779 290 Gene3D WRKY domain 140 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g03779 290 MobiDBLite consensus disorder prediction 101 140 - -
Pste3g03779 290 Pfam WRKY DNA -binding domain 158 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g03779 290 Coils Coil 65 92 - -
Pste3g03779 290 ProSiteProfiles WRKY domain profile. 152 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03779 Pste-Chr3 30055809 30057577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03779 8 290 WRKY Transcription Factor Family AT1G80840 51.235 1.27e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g03779 WRKY 9.4e-23 CL0274