Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03778 AATATAAACACAGTACCGCCAATTTTGCACTTCATCCAGATTAATTAACTCCTTCGCTTTCATTGGATCCCATTTCTGTCTTCAAAATATTTGCCTCTCTGAAAGGGAAAAGTGATAAAATGGTTGTGACCGGTTCTGGTTCTGGTTCTGGTTCTGGTTCTCGGCAGCCGCAGTTCATTTCGAGCACCTGCAACCGAAGCCTTTCCAATGCGCCACTCATTCAGAACTCAGATACTAATCAAATTGTTGTGCCTGATAGGAGAAGCTGGAAAAATTTATTTGCATACATGGGGCCTGGGTTTCTTGTTTCCATTGCATATATAGACCCAGGAAACTTCGAGACGGATCTACAGTCTGGGGCACAATATAAATATGAGCTACTTTGGATCATATTGGTGGCATCATGTGCTGCTCTAGTCATTCAATCAATGGCAGCCAATCTTGGGGTGGTCACTGGAAAACACCTAGCAGAGCACTGTAGAACTGAATATCCCCGGGTACCCAACTTCATCCTTTGGATTATTGCTGAAATTGCCATAGTGGCCTGTGATATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTCTTCAACATACCTGTTTGGATTGGTGTTCTTCTCACAGGACTCAGCACATTGATCCTCTTAGCATTGCAGCAATATGGGGTTAGGAAACTTGAATTCTTGATTGCATTTCTAGTCTTTACAATTGCTGCATGTTTTATGGCTGAACTTGGATACGCAAAGCCTGATGCAAAAGAAGTTCTGAAAGGTCTTTTTGTGCCAGAACTAAAAGGGAGTGGTGCTACTGGTCTTGCAATTTCACTCCTTGGAGCTATGGTTATGCCGCACAACCTCTTCCTTCACTCAGCACTGGTGCTTTCTAGGAAAATACCACGATCAGTTCGGGGAATTAAAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTCATGGTGGCCTTCCTCATAAATGTTTCTGTTATTTCCGTAAGTGGTGCTGTTTGCAATTCTTCAAATTTGAATGCAGAAGATCAATTGAGCTGTCAGGATTTGGATCTGAACAAAGCCTCCTTCCTACTTAGAAATGTCTTGGGGAAATGGAGTTCAAAACTGTTTGGAATTGCTTTGCTTGCATCAGGTCAAAGTTCTACGATAACAGGCACCTATGCAGGGCAGTATGTCATGCAGGGCTTTCTGGATTTACGACTTCAGCCATGGATTCGGAATATGTTAACTCGTTGCTTAGCCATAGTTCCTAGTTTGATTGTTGCAGTCATTGGTGGTTCTGCTGGGGCTGGGAAGCTCATAATAATTGCATCCAGTTGGTCTCTACTCTCTAGCTCTGCCATAGCCTGTATTGAAGCCCTTCTTGTCTGTTTTGTGGATCAGATGATCTTATCATTTGAGCTTCCTTTTGCTTTGGTTCCTCTCCTCAAGTTTACAAGTAGCAAAACCAAGATGGGAGCACATGTCAACTCTACCATGATTTCTGCTGTTACTTGGATAATCGGTACTCTCATCATGGCCATTAATATATACTACTTAATAACTGGCTTCATCAAGCTGCTTCTTCATAGTCACTTTAAAATTGTGGCTAAGGTGTTTCTCGGAATATTAGGATTTTCAGGCATGGCAATATATTTGGCTGGTATAACATATCTAGTACTCCGCAAAAATAAAGAAGCTACACACCTTTTGGCTCTAACAGCACAAGAAAATCAACAAATGACAAATGAACAAGGCAACGGGTCAATCTACACTCTTCCAAGAGAAGACATAGTAAGCATGCAATTACCTCAAAGAAGTAGTCCAGCAGATCTTGACTGACAAATATGTCTCAATAGCATGATACATTCACATAAATAAATATCATTCTGTTCATTTCTAGAATCGCTAATCTTGGACTAGTATCAGATTCATCTCTGCTGTCATTTGATTGGAATTACTTTTTTTTTTTCCCGTGTGAC 1981 0.4119 MVVTGSGSGSGSGSRQPQFISSTCNRSLSNAPLIQNSDTNQIVVPDRRSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSMAANLGVVTGKHLAEHCRTEYPRVPNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVFTIAACFMAELGYAKPDAKEVLKGLFVPELKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYMIESAFALMVAFLINVSVISVSGAVCNSSNLNAEDQLSCQDLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLDLRLQPWIRNMLTRCLAIVPSLIVAVIGGSAGAGKLIIIASSWSLLSSSAIACIEALLVCFVDQMILSFELPFALVPLLKFTSSKTKMGAHVNSTMISAVTWIIGTLIMAINIYYLITGFIKLLLHSHFKIVAKVFLGILGFSGMAIYLAGITYLVLRKNKEATHLLALTAQENQQMTNEQGNGSIYTLPREDIVSMQLPQRSSPADLD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03778 573 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 45 528 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 Hamap Divalent metal cation transporter MntH [mntH]. 34 484 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 185 206 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 235 258 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 132 158 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 PRINTS Natural resistance-associated macrophage protein signature 160 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 52 400 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 Pfam Natural resistance-associated macrophage protein 73 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste3g03778 573 NCBIfam Nramp family divalent metal transporter 58 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03778 Pste-Chr3 29992579 29998998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03778 21 566 Inorganic Solute Cotransporters AT1G15960 78.102 0.0 872