Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03777 AAGCAAAAGCATGACGTGGGAGTCGGAGATAATTTGTGTGACCGGCGCCGGTGGCTTCATCGCGTCTTGGATGGTGAAGCTCCTTTTGGAGAGAGGCTACACTGTGAGGGGAACCCTCAGAAACCCAGGCACGTCCACTCTTTCTCTTTTATGTTTTAATTGCGTCATGGTCATCGTCATCGTCATCTTCATCTTCATCTTCATCTTCATCCTCATCCTCATGCAGATGATCCCAAGAACAGCCACCTCAAAGACTTGGAAGGAGCCTCCGAGAGGCTTACTCTCCACAAGCTTGACCTCCTTCACCTTGACTCCATCCGTTATCAACGGCTGTCACGGCGTCTTCCACACTGCTTCTCCCGTCACCGATAACCCCGAAGAAATGGTGGAGCCCGCCGTGAATGGAGCAAAGAATGTCATCACAGCTGCTGCAGAAGCCAAAGTCAGACGTGTCGTCTTCACCTCATCAATCGGGGCTGTCTATATGGACCCCAACAGGAGCGTCGATTCCCTCGTCGACGAGTCATGTTGGAGTGATTTAGAATATTGCAAGAACACCAAGAATTGGTATTGCTATGGGAAAGCAGTGGCAGAAAAAGCGGCATGGGAGACGGCGAAAGAGAAAGGGGTGGACTTGGTGGTGGTGAATCCGGTGTTGGTGCTGGGACCATTACTACAACCAACAATCAATGCCAGCACAATTCACATCCTCAAGTACCTCACTGGCTCTGCCAAGACTTATGCAAACGCCACCCAGGCTTATGTCCATGTCAGGGATGTCGCATTGGCTCACATCCTTGTTTACCAGAACCCTTCTGCTTCCGGTCGATACTTATGTGCTCAATCCTCCCTCCATCGCGGAGACCTCGTTCAAATTCTCTCTACCTATTTCCCTGACTACCCCCTTCCCACCAAGTGTTCAGATGAAAAGAATCCCAGAGCAAAACCCTACACATTTTCAAATCAAAAGTTGAAAGATTTGGGATTGGAATTCACTCCAATCAACCAATGTCTGTATGAAACCGTGAAGAGCCTGCAGGAGAAAGGCCACCTTCCTCTTCCTGCAAAGCAGCAAGATTCAGCTACAGTAAAATCGTAAATGAGCTACGCCTTTCTATCTCATTTGTGATCAACAGTTTAATTCAGGACAAGAAGCTGCCACCTTTGGCGATTTGGGCTCATGTTATATTAAAGAGAATCCTACATTAGAAGATTGTATTTGGATTTGGTAAAACAAAAGACATCAACTAAATTGTTGCCGAGTATGAACTTTGATAATATTATTAATGGAATTTATTCCCTTTGTTGAGTTGGATTATTCTGCTCCCAAGTTACTTAACCTCTCACTTAAATGAAATTGTACTCTTCAATAATTTTTAAATAACATTATCCCGTGCAATCCCAAGATGGGGAGAAGGGTGGTTGGGGAGACA 1433 0.4606 MTWESEIICVTGAGGFIASWMVKLLLERGYTVRGTLRNPGTSTLSLLCFNCVMVIVIVIFIFIFIFILILMQMIPRTATSKTWKEPPRGLLSTSLTSFTLTPSVINGCHGVFHTASPVTDNPEEMVEPAVNGAKNVITAAAEAKVRRVVFTSSIGAVYMDPNRSVDSLVDESCWSDLEYCKNTKNWYCYGKAVAEKAAWETAKEKGVDLVVVNPVLVLGPLLQPTINASTIHILKYLTGSAKTYANATQAYVHVRDVALAHILVYQNPSASGRYLCAQSSLHRGDLVQILSTYFPDYPLPTKCSDEKNPRAKPYTFSNQKLKDLGLEFTPINQCLYETVKSLQEKGHLPLPAKQQDSATVKS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03777 362 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 339 - -
Pste3g03777 362 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 350 IPR036291 -
Pste3g03777 362 Gene3D - 1 50 - -
Pste3g03777 362 Gene3D - 89 362 - -
Pste3g03777 362 CDD FR_SDR_e 9 326 - -
Pste3g03777 362 Pfam NAD dependent epimerase/dehydratase family 107 270 IPR001509 -
Pste3g03777 362 FunFam Cinnamoyl-CoA reductase 1 90 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03777 Pste-Chr3 29989832 29991994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03777 125 348 Monolignol Biosynthesis Gene Families AT1G15950 80.804 4.49e-126 360
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03777 3 29989832 29991994 Pste6g00412 6 1454212 1455583 PCT