Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03775 TTGGGCATTTGCATCAGGCCGCGACTTTTACATATATATATAGCAGTGATGACAATTGAGTGATTAAAAAACACAGTTAAGATGGAGGAGGAAATCCCCTCAACACCAGCAACACCAGGCACTCCAGGAGCACCTCTTTTTGGTGGCTTCAACAAGAATAAGAATAAGAATTCCATTCTGAAAAGCTGTAGGTGCTTCAGTGTGGAGGATTGGAGCTTAGAAGATGGAGGGTTACCCGCAGTTTCATGCTCACTGCCAGGCCCTCCTCCAGTCTCTCTTGCAAGAAAGGTTGGAGCCGAGTTCATTGGCACCTTCATTCTCATGTTCGCCGCCACCGCCGCCGCCATTGTCGACCAAAAGACTCACGGCTCCCATACTCTTCTTGGATGTGCTGCCACCACTGGTCTTGCCGTTATGATCGTCATCCTCTCCACCGGCCACATCTCCGGTGCCCATCTCAACCCTGCTGTCACCCTTTCCTTTGCTGCACTCAAGCACTTCCCATGGAAGCATGTCCCTATGTATATTGCTGCTCAAGTTTTGGCTTCTATTTCTTCCTCCTTTGCTCTCAAGGGGGTTTATCACCCTTTCATCACTGGTGGAGTCACCGTTCCTTCAGGAGGATATGCCCAAGCTTTCGCCTTAGAATTCATCATTGCCTTTAATCTCATGTTCGTTGTTACTGCCGTCGCCACCGACACCAGAGCTGTGGGGGAGCTCGCGGGAATAGCGGTGGGAGCGACTGTAATGCTTAATATACTCATAGCAGGGCCAGTATCAGGGGGCTCAATGAATCCAGTAAGAACACTAGGTCCTGCGGTGGCCGCAAACAACTACAAAGCCATATGGGTGTACATGGTAGCTCCCGTACTTGGAGCTTTAGGTGGAGCAGGTACCTACACTGCAGTCAAGCTGCCTGAAGAAGATGATGACGCCAAGGCAAAGGCTTCAATCAGCTTCCAAAGGTGACTTGGAATTGCCATCACGCAAAATGATAGAATGCTTGTGCTTTTAAATGAAGGAAAAGTGGGAATTAATTGTTTCGGAAACTGCATATGTTAGATATATAAAATGTGTGCTTTAATTTAGTGTATGATGTATCATTCTATCTACTAATGTATATTTGCAAAAAACAAAAAAACGAGTGGTGTTTGTTTGGTACATAAAAATACAACAATTCGCCCCCCCTGTTTTGTGAGGAAGTTGATAGACGAGAGTAAAGAGTGTTGTTTCGGTGCACAGAAAGCTGGTGCC 1254 0.4673 MEEEIPSTPATPGTPGAPLFGGFNKNKNKNSILKSCRCFSVEDWSLEDGGLPAVSCSLPGPPPVSLARKVGAEFIGTFILMFAATAAAIVDQKTHGSHTLLGCAATTGLAVMIVILSTGHISGAHLNPAVTLSFAALKHFPWKHVPMYIAAQVLASISSSFALKGVYHPFITGGVTVPSGGYAQAFALEFIIAFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPVSGGSMNPVRTLGPAVAANNYKAIWVYMVAPVLGALGGAGTYTAVKLPEEDDDAKAKASISFQR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03775 295 FunFam Aquaporin NIP2-1 57 288 - -
Pste3g03775 295 CDD MIP 68 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g03775 295 Gene3D Glycerol uptake facilitator protein. 62 288 IPR023271 -
Pste3g03775 295 ProSitePatterns MIP family signature. 125 133 IPR022357 -
Pste3g03775 295 Pfam Major intrinsic protein 65 272 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 SUPERFAMILY Aquaporin-like 65 282 IPR023271 -
Pste3g03775 295 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PRINTS Major intrinsic protein family signature 188 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PRINTS Major intrinsic protein family signature 144 163 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PRINTS Major intrinsic protein family signature 107 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g03775 295 PANTHER AQUAPORIN NIP2-1 30 281 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03775 Pste-Chr3 29959264 29961716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03775 2 295 Major Intrinsic Protein MIP AT1G80760 72.876 1.83e-157 439