Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03771 AACAATAATAATAATAATTAGAGAACAACATGGGAGGTCTCGAAGATATCAAGAACGAGGCAGTGGATCTCGAGCGGATACCCGTGGATGAAGTGTTCCGAGAATTGAACTGTTCCAAGGAAGGTCTCTCAAATGAGGAAGGCCAAAAGAGGTTGCAAGATAGCAAGGTGTTAAAATTCTTGGGTTTTATGTGGAACCCTCTCTCTTGGGTCATGGAAGCCGCAGCCATCATGGCCATTGCATTGGCAAATGGAGGGGGTGAGCCACCGGACTGGCAGGACTTTGTGGGAATAGTGGTGTTACTGATTGTGAACTCAACCATTAGTTTTATCGAGGAAAACAATGCAGGCAACGCTGCTGCTGCACTTATGGCAGGGCTTGCACCCAAAACCAAGCAAGGAGAGCTTGAGGCTGTTGTAATCGCCACTGGGGTCCACACCTTCTTTGGTAAGGCTGCTCATTTAGTAGACAACACCAACCAAGTTGGCCATTTCCAAAAGGCAAGAGATGGCATTACAGAGGTGCATTTCCTGCCCTTTAATCCAGTGGACAAGCGAACAGCCATAACATACATAGACACCGAGGGTAACTGGCACCGTGTAAGCAAAGGTGCACCTGAGCAGATTATCGAACTTTGCAACCTTCGGGAAGACGTGAAGAAGAAGGCTACTTCCATCATTGATAAATTTGCTGATCGCGGTCTTCGTTCCCTTGCTGTTTGCAAACAAGAAGTGCCAGAAAGGAACAAGGAGAGTGCAGGAGGACCATGGCAGTTTGTTGGTTTGTTGCCACTTTTTGACCCACCAAGGCATGACAGTGCAGAGACCATAAGGCGTGCTCTCAATCTGGGAGTGAATGTTAAGATGATTACTGGTGATCAACTAGCTATTGGTAAGGAAACTGGTCGCAGACTTGGCATGGGAAGCAACATGTACCCTTCATCCTCTCTCCTTGGTGAGCACAAGGATGAGTCCATTGCTGGCCTTCCAATCGATGAACTTATTGAGAAGGCTGATGGCTTTGCCGGTGTCTTCCCCGAGCATAAGTACGAGATTGTGAAGAGACTTCAGGAAAGGGATCACATATGTGGGATGACAGGAGATGGTGTGAACGATGCTCCTGCCCTCAAAAGAGCAGATATTGGAATTGCTGTGGCTGATGCAACCGATGCTGCTCGAGGTGCATCTGACATAGTCCTCACTGAACCTGGCTTGAGTGTGATTGTGAGTGCAGTGTTGACAAGTAGAGCCATCTTCCAGAGAATGAAGAACTACACCATATATGCTGTTTCTATAACAATCCGAATAGTGCTGGGCTTTATGCTGATTGCACTCATATGGAAGTTTGACTTCTCACCCTTTATGGTTTTGATCATTGCCATACTCAATGATGGGACCATCATGACAATTTCCAAGGACAGGGTGAAGCCATCTCCTATGCCAGATTCCTGGAAGCTGAGAGAGATTTTTGTTACCGGCATTGTGCTTGGTGCCTACCTGGCTGTAATGACTGTTGTCTTCTTCTGGGCTGCTCACGCATCAAATTTCTTCTCGGACAAATTTGGCGTGAGATCCATCAGGAACAACCACAGTGAGCTCACAGCAGCTGTTTATCTTCAAGTGAGTATTGTAAGTCAGGCTCTCATCTTTGTTACACGGTCAAGGAGCTGGTCTTTTGTTGAACGTCCAGGCTTCTTTCTTATGATTGCCTTTGTCATAGCACAGCTGATTGCGACGCTGATAGCCGTGTATGCAAACTGGGGATTTGCAAAAATTAAAGGGGTTGGATGGGGTTGGGCCGGTGTGATTTGGCTCTACAGCATTGTATTCTACTTACCCATGGATGTACTCAAGTTCATCGTGCGATATGCATTGACTGGGAAGGCATGGAATAATATAACAGAGAATAGGATAGCATTCACCACAAAGAAGGATTATGGAAAGGGAGAGAGAGAGGCACAATGGGCTGCAGCTCAAAGGACATTGCATGGCCTGAATCCACCTGAAACGGACGAAATGTTGAATGAAAAGAACAACTATAGAGAATTGTCCGAACTTGCAGAACAGGCCAGAAAGCGTGCTGAAGTTGCAAGGCTAAGGGAGCTTCACACTCTAAAGGGCCATGTTGAGTCTGTAGTCAAACTCAAGGGGCTCGATATTGAGACAATTCAGCAGCACTACACTGTTTGATTGTTGTTGGAAGTTGGAACAAAACATAGATTAGAAGACAAACAGAAGAGAATTAGACAATTTTATTATATTGCCCTTGTCGTCTCAAATCTCTTTTGGATTTTGAAGAACGAATGCAACGGCTCTAGAATAATATTCCAACACTTCGAGATTGTGCTTCACAGTCCATGGTTGGGGACCTGTTTTTTTCTTTTTCCCGATGTTCTCATCAATTTGTC 2407 0.4562 MGGLEDIKNEAVDLERIPVDEVFRELNCSKEGLSNEEGQKRLQDSKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGEPPDWQDFVGIVVLLIVNSTISFIEENNAGNAAAALMAGLAPKTKQGELEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKARDGITEVHFLPFNPVDKRTAITYIDTEGNWHRVSKGAPEQIIELCNLREDVKKKATSIIDKFADRGLRSLAVCKQEVPERNKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESIAGLPIDELIEKADGFAGVFPEHKYEIVKRLQERDHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLREIFVTGIVLGAYLAVMTVVFFWAAHASNFFSDKFGVRSIRNNHSELTAAVYLQVSIVSQALIFVTRSRSWSFVERPGFFLMIAFVIAQLIATLIAVYANWGFAKIKGVGWGWAGVIWLYSIVFYLPMDVLKFIVRYALTGKAWNNITENRIAFTTKKDYGKGEREAQWAAAQRTLHGLNPPETDEMLNEKNNYRELSELAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03771 719 NCBIfam HAD-IC family P-type ATPase 331 444 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 FunFam ATPase 4 plasma membrane-type 340 583 - -
Pste3g03771 719 PANTHER CALCIUM-TRANSPORTING ATPASE 158 651 - -
Pste3g03771 719 FunFam Membrane H(+)-ATPase1 196 256 - -
Pste3g03771 719 SMART Cation_ATPase_N_a_2 13 74 IPR004014 -
Pste3g03771 719 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 614 IPR023298 -
Pste3g03771 719 Coils Coil 663 690 - -
Pste3g03771 719 PRINTS H+-transporting ATPase (proton pump) signature 387 412 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 PRINTS H+-transporting ATPase (proton pump) signature 528 549 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 PRINTS H+-transporting ATPase (proton pump) signature 328 344 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 PRINTS H+-transporting ATPase (proton pump) signature 356 372 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 PRINTS H+-transporting ATPase (proton pump) signature 213 231 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste3g03771 719 Gene3D - 257 393 IPR023214 -
Pste3g03771 719 Pfam haloacid dehalogenase-like hydrolase 180 370 - -
Pste3g03771 719 PRINTS P-type cation-transporting ATPase superfamily signature 251 262 - -
Pste3g03771 719 PRINTS P-type cation-transporting ATPase superfamily signature 379 391 - -
Pste3g03771 719 PRINTS P-type cation-transporting ATPase superfamily signature 356 375 - -
Pste3g03771 719 PRINTS P-type cation-transporting ATPase superfamily signature 273 283 - -
Pste3g03771 719 SUPERFAMILY HAD-like 248 402 IPR036412 -
Pste3g03771 719 Gene3D - 668 719 - -
Pste3g03771 719 FunFam Plasma membrane ATPase 249 404 - -
Pste3g03771 719 Gene3D - 53 127 - -
Pste3g03771 719 Gene3D - 394 583 - -
Pste3g03771 719 Gene3D - 154 256 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03771 Pste-Chr3 29891268 29895620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03771 152 719 Primary Pumps ATPases AT3G42640 81.690 0.0 976