Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03768 ATGGATTAAAAAGTGCTTTCTCGATTTTCCTGAAAGAAGAACCTTTGTGCTTTTGTCCATTTCTGCACTGCCAAATATTTGTTTCAAAATTGAACAAGAAAAGAAAAAACCTTCTCTTGCTAATAAGTTATTCCACCCCTCTGTCTCACTCTCCTTGAATAAGGTCGCCCCAGATGAATCTTCTTCTTCTTCTGTTCCTGCCTATTTGGGTGCTAAGTATTTCTCTTTCCTCACCAATTCTTCATGCTACATCCTCCATTTCTGTTTCTCAAAATGCACAAGCTGAACCTCCAGTGCATCACCAGAATTTGAATAAGAGAATTCTAATTGCACTAGTTGCGTGTTCTGCTCTTCTTGGTGGAGTGTTCCTATTCTTATTATATGTCTGGTTCCGTCGACATAAACACACAAGAGGCTCCACACGTAAAAGCCAACAAACCATTGAGACTGCAAAAGGGGAAACCTTAAGCTCGGTTAATGCTAAAATTAACTACTCTAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGACTATCAGCTGTTAGAGGCAGCAACAAACAGCTTTTGTCCAAGTAATATTATGGGAGAGAGTGGTTCTAGAATCATTTACAGAGCTCGGTTTGATGAGCATTTCCAGGCAGCTGTGAAGAAAGCAGATAGTGATGCTGATAGAGAATTTCAGAATGAAGTGAGTTGGTTGAGCAAGATACGGCATCAGGATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTCTGGAAACTCAATTGCACGGTACATTTTTCCTTGGTGTTTATCAAGAAAAGAGAAGAAAAAAAAAACATGTACGGAACTTAATAATCATATGTTGCTCATTGGTATCAACAATGGTAGGGCCAAATCGGGGGACATCTTTAACTTGGCATCTCAGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCACGAGCACAACAATCCACCTGTGGTTCATAGGGACATAAAATCTTCTAATGTTCTTCTGGATTCTAACTTCAATGCCAAGTTATCAGATTTTGGATTTGCTATGGTTTCGGGACTGCAACACAAGAACATAAATATGTCAGGAACTTTAGGATATGTAGCCCCCGAGTACATATCACATGGTAAACTAACTGATAAGAGTGATGTCTATGCTTTTGGGGTTGTCCTTTTAGAACTCCTAACTGGGAGAAAATCCATGGAGAACATGACCTCAAACCAATATCTATCCCTTGTATCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCTAGTATTCTGGATCCTGTTATCAAAGATACAATGGATTTGAAGCATTTATACCAGGTTGCTGCAGTGGCTGTACTCTGCGTGCAAGCAGAACCAAGTTATAGGCCACTAATAACAGATGTGTTGCACTCTCTTATCCCTTTGGTACCCGTTGAGCTTGGAGGGTCATTAAGAGTTACAGAACCAATCAGCTCCGAGAACCCTCATTGATATTGAAAATTTGCGTTTTCCGTTTTCAACTATCGTATTTGTGC 1585 0.3968 MNLLLLLFLPIWVLSISLSSPILHATSSISVSQNAQAEPPVHHQNLNKRILIALVACSALLGGVFLFLLYVWFRRHKHTRGSTRKSQQTIETAKGETLSSVNAKINYSRMADKKSSVAIFDYQLLEAATNSFCPSNIMGESGSRIIYRARFDEHFQAAVKKADSDADREFQNEVSWLSKIRHQDIIKLMGYCIHGESRFLVYELMENGSLETQLHGTFFLGVYQEKRRKKKHVRNLIIICCSLVSTMVGPNRGTSLTWHLRLRIAVDVARALEYLHEHNNPPVVHRDIKSSNVLLDSNFNAKLSDFGFAMVSGLQHKNINMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKSMENMTSNQYLSLVSWAMPQLTDRSKLPSILDPVIKDTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSENPH 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03768 455 SUPERFAMILY Protein kinase-like (PK-like) 107 431 IPR011009 -
Pste3g03768 455 PANTHER OS01G0750732 PROTEIN 36 434 - -
Pste3g03768 455 SMART serkin_6 132 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03768 455 ProSiteProfiles Protein kinase domain profile. 132 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03768 455 FunFam probable receptor-like protein kinase At1g80640 238 436 - -
Pste3g03768 455 Gene3D Phosphorylase Kinase; domain 1 92 204 - -
Pste3g03768 455 Pfam Protein tyrosine and serine/threonine kinase 152 398 IPR001245 GO:0004672|GO:0006468
Pste3g03768 455 Gene3D Transferase(Phosphotransferase) domain 1 205 436 - -
Pste3g03768 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03768 Pste-Chr3 29873140 29876701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03768 4 377 Receptor kinase-like Gene Family AT1G80640 41.500 4.22e-94 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Pste3g03768 PK_Tyr_Ser-Thr 1.5e-41 CL0016