Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03761 ATGGGAAAGGGGGAGGAGGAAGGGGTAAAAGAGATGTGGAGTTCAACTTCAAGCACAGCAGCGATTGCAGCAGGGTCGTCGGAGGAGGAGCGGTTCTCGACATCATTGTTGAATTTCTCTTCTGGAAACCCTAGAATCGAGGAGACACGTGGGCTGATGCATCTGTTCCGGGAAGACAATCTTCCCGTTGGACGGAAACCTCTTGTGTGTGTTGTGGGCGTGCCCAATCACATGACCTATGCCGATTTCTGCCAGTTCTGCGGTTCCTTCATTCAGCACATGCTGGAGATGCGCATTGTGAGGATGGATGGTATGGAGGATCAGTACAGTGTTTTAATTCGTTTTGACCATCAAGACTCCACCGACAGCTTCTACAACCACTACAATGGCCGCCGTTTCTCTTCTCTCGAGGTTGAGGTTTGCCGTGTTCTTTTCACATTAGACGTGCAGTACACTGGTTCCATTGAGCATGCGCAACCCTCCAATGCCAGTTCAACTGAACAGCCTACGTGTCCTGTTTGCCTCGAGCGATTGGATCAGGACACCGGTGGAATTCTTACGACTATCTGCAACCATTCTTTCCATTGTTCCTGTATTTCAAAATGGGCAGATTCTTCTTGTCCTGTCTGTCGATATTGCCAGCAGCAAGCTGAAAAATCTATATGTTTCGTTTGTCAAACCACTGAGAACCTTTGGATATGTGTTATATGTGGGTATGTTGGCTGTGGAAGATACGCGGGAGGACATGCTATAATACACTGGAAAGAGACGCAGCATTGCTATTCCCTAGAAGTGGAAACCAAACGCGTTTGGGATTATGTGGGGGACAACTATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAGTTGGTTGAGCTGAACACTCCCTGTGCACACACAGACAATGGATGTGGAAGTTGCAGCTGTGAAGATAATGCCATGAGTGAGGCTATACTTAATAGTAAAGTTGAAGCTATTGTCAATGAGTACAATGAATTGTTAGCTACTCAACTTGAAAACCAAAAATTATATTTTGAATCCTTATTAAAAGAAGTTAAAGAAGAGTCTGAAAAAAGGATTTCCAAAGCTGTTCAGAAGGCCATTAGTCTTAAACAGCAGAAGATTCAGTCCAAGCTTGACAGATGTAAGAAAGAGAAGAAATTTCTGGATGATCTTAATGAGAATCTTGTAAAAAATGAGGACATTTGGAAAGCAAAGATACTTGAGATTGAAGAGAGGTCTGCAGTTGCTGCTTTGACGAGCACTAGACATTTTAAGGGATATTCACTTTCTTGA 1299 0.4388 MGKGEEEGVKEMWSSTSSTAAIAAGSSEEERFSTSLLNFSSGNPRIEETRGLMHLFREDNLPVGRKPLVCVVGVPNHMTYADFCQFCGSFIQHMLEMRIVRMDGMEDQYSVLIRFDHQDSTDSFYNHYNGRRFSSLEVEVCRVLFTLDVQYTGSIEHAQPSNASSTEQPTCPVCLERLDQDTGGILTTICNHSFHCSCISKWADSSCPVCRYCQQQAEKSICFVCQTTENLWICVICGYVGCGRYAGGHAIIHWKETQHCYSLEVETKRVWDYVGDNYVHRLIQSKTDGKLVELNTPCAHTDNGCGSCSCEDNAMSEAILNSKVEAIVNEYNELLATQLENQKLYFESLLKEVKEESEKRISKAVQKAISLKQQKIQSKLDRCKKEKKFLDDLNENLVKNEDIWKAKILEIEERSAVAALTSTRHFKGYSLS 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03761 432 Pfam BRCA1-associated protein 2 61 158 IPR011422 -
Pste3g03761 432 PANTHER BRCA1-ASSOCIATED PROTEIN 14 418 - -
Pste3g03761 432 SMART Zf_UBP_1 221 270 IPR001607 GO:0008270
Pste3g03761 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 213 IPR013083 -
Pste3g03761 432 Coils Coil 354 374 - -
Pste3g03761 432 SUPERFAMILY RING/U-box 187 286 - -
Pste3g03761 432 Pfam Ring finger domain 170 211 IPR001841 -
Pste3g03761 432 CDD RRM_BRAP2_like 69 150 - -
Pste3g03761 432 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 214 292 IPR013083 -
Pste3g03761 432 CDD RING-H2_BRAP2 169 212 IPR047243 -
Pste3g03761 432 Coils Coil 380 400 - -
Pste3g03761 432 ProSiteProfiles Zinc finger RING-type profile. 171 211 IPR001841 -
Pste3g03761 432 ProSiteProfiles Zinc finger UBP-type profile. 205 298 IPR001607 GO:0008270
Pste3g03761 432 Pfam Zn-finger in ubiquitin-hydrolases and other protein 222 281 IPR001607 GO:0008270
Pste3g03761 432 SMART ring_2 171 210 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03761 Pste-Chr3 29797623 29799819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03761 167 211 C3H Transcription Factor Family AT1G72220 46.809 5.62e-07 49.7