Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03740 ATGGGCATATTCAGGTGGGGTACCTTGTTTTTCTATGTGCTCCTTTTGTTTAGTACCTGCCTGGCCAAAGATCAACTTCAACATATTAGTCAGATATATCCTGGGTTCAGTGCATCTCAGCCGGATTGGAGCAAGCATAATGGTTTTTTCTTGCTGTCCAACAGCTCAGCTTTCGCTTTTGGATTCTTTACTACTCTTGAAGTTTCATCGTTTGTTTTAGTTGTCATGCACTTAAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTGGGACTTCTGATAAATTTGTGTTTGAGCCTAGTGGGAATGCATATTTGGAAAGGGGGAATGCCGTAGTTTGGGCAACAAATACAAGAGGACAAAAAGTTAAATCCATGGAATTGCTAGACTCAGGGAATTTGGTGTTGATTGGGGAAAATGGGACTGCTATTTGGCAAAGTTTTACTCATCCCACTGATACTCTTTTGCCTGGACAAGTTTTTGTGGAAGGAATGACACTCAAAAGCTTCCACAACAGCTTGAACTTGTATAATTATCTTAGTTATCAGGCAGGTGATTTGCTTCTCTCTGCAGGATATGAACCTCCACAGGTGTACTGGTCCCTATTAGGGGAAGTCCAGAGAAGCTCAAAAAATAACAGTGGTAAGGTTCACTCAGCGTCTTTAGTGTCCAATTCATTGAACTTTTATGACATAAATAGAGCTTTGCTGTGGAAAGTTGTCTTCTCTGACCTCTCAGATCCCAAGTCATTGTGGGCTGCTACCTTAGAACCAAATGGTGCAATCAACTTTTATGATCTCAACAAAGGGAGGTCTCCTAACGCTGAGGCAGTTAAGGTACCACAAGACCCTTGTGGCACTCCTCAGCCTTGTGATCCTTATTATGTTTGCTTCAATGAAAACTGGTGTATCTGCCCCAAACTTCTCAGATCTCGTTTTAACTGCAAACCTCCCAATATCACCACCTGTTCCAGGAGTTCAACAGAACTTTTATATGTTGGTGAAGAGCTTGATTATTTTGCTCTCAAGTACACTGCTCCGGTTTCAAAATCAACCCTGAATGCTTGCAAAGACTCTTGTTTAGGAAACTGCTCATGCCTTGTGCTTTTCTTTGAAAACAGTACTGGAAGATGCTTTCATTTTGATCAGACTGGGAGTTTCCAACGCTATAGGAGGGGCACCGGTGACAGTAGTTATGTTTCATTCATGAAGATCTCCATTAGTAGTTATGATGGACATGACAACAAAAATGGAAGGAATGACTCGGTGCTAGTTATTGTCATAGCAGTTCTCACAGTTCTGGTTATAATTGGTCTTATAACAGGATTCTGGTACTACTACAAGAGGAAGAAGAATGTTACTAAGGACCCTCTAGACACCTTTGAGGAAGATGATGATTTCTTGGACAGTCTCTCTGGGATGCCTGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACGAAGGACTTCTCCACAAAAATTGGGGAAGGAGGTTTTGGCTCAGTGTATTTGGGTGTGCTTGAAGATGGCACCCAGTTGGCTGTGAAAAAATTGGAAGGTGTTGGACAAGGTGCAAAAGAGTTTAAAGCAGAAGTGTCCATAATAGGAAGTATTCATCATGTTCATCTGGTCAAGCTCAAAGGGTTCTGTGCAGAGGGTCCTCATCGCCTTCTTGTCTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACACCTTCTTGTTGAACTGGGAGACCAGGTACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTGCATGAGGAGTGCGAAGTGAGGATCATTCACTGTGATATTAAGCCACAAAATGTTCTTCTTGATGATAACTTCACAGCTAAGGTTTCAGATTTTGGATTGGCTAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACCCTAAGGGGCACAAGAGGGTATTTAGCGCCAGAATGGATAACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGCTCTTGCTTGAGATGATTGGGGGTAGGAAGAACTATGATCAATGGGAAGGGGCGGAGAAAGCACATTTTCCTTCTTATGTGTTCAGAATGATGGATGAAGGGAAACTGAAACAGGTTCTTGATTCAAAGATAGATATTGATGAGAAGGATGAAAGGGTTGAGGCTACTATTAAAGTAGCTCTTTGGTGCATACAAGATGACGTGACTTTGAGGCCTTCCATGACTAAGGTAGCGCAGATGCTTGAAGGTTTGTGCCCTGTACCTGATCCCCCTTCATTATCTCAATCCGCTACTTATTCAGCTTTCATGAAATTGAGTAGTGGAGAAGCTACTTCATCGGGACAAGCTAGTTTTTTTAGTAATGTACCCATGTCGTGTGTTCAATTATCAGGACCAAGATGA 2442 0.4242 MGIFRWGTLFFYVLLLFSTCLAKDQLQHISQIYPGFSASQPDWSKHNGFFLLSNSSAFAFGFFTTLEVSSFVLVVMHLSSYKVVWTANRGLLVGTSDKFVFEPSGNAYLERGNAVVWATNTRGQKVKSMELLDSGNLVLIGENGTAIWQSFTHPTDTLLPGQVFVEGMTLKSFHNSLNLYNYLSYQAGDLLLSAGYEPPQVYWSLLGEVQRSSKNNSGKVHSASLVSNSLNFYDINRALLWKVVFSDLSDPKSLWAATLEPNGAINFYDLNKGRSPNAEAVKVPQDPCGTPQPCDPYYVCFNENWCICPKLLRSRFNCKPPNITTCSRSSTELLYVGEELDYFALKYTAPVSKSTLNACKDSCLGNCSCLVLFFENSTGRCFHFDQTGSFQRYRRGTGDSSYVSFMKISISSYDGHDNKNGRNDSVLVIVIAVLTVLVIIGLITGFWYYYKRKKNVTKDPLDTFEEDDDFLDSLSGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGVLEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENTFLLNWETRYNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEMIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLKQVLDSKIDIDEKDERVEATIKVALWCIQDDVTLRPSMTKVAQMLEGLCPVPDPPSLSQSATYSAFMKLSSGEATSSGQASFFSNVPMSCVQLSGPR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03740 813 CDD STKc_IRAK 497 764 - -
Pste3g03740 813 SMART blect_4 42 154 IPR001480 -
Pste3g03740 813 CDD B_lectin 47 154 IPR001480 -
Pste3g03740 813 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03740 813 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03740 813 Pfam D-mannose binding lectin 83 163 IPR001480 -
Pste3g03740 813 SUPERFAMILY Protein kinase-like (PK-like) 475 762 IPR011009 -
Pste3g03740 813 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 41 772 - -
Pste3g03740 813 FunFam serine/threonine-protein kinase PBS1-like 461 565 - -
Pste3g03740 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Pste3g03740 813 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03740 813 PIRSF SRK 6 810 IPR024171 GO:0004674
Pste3g03740 813 Gene3D Transferase(Phosphotransferase) domain 1 566 764 - -
Pste3g03740 813 Gene3D Phosphorylase Kinase; domain 1 463 565 - -
Pste3g03740 813 Gene3D - 40 155 IPR036426 -
Pste3g03740 813 ProSiteProfiles PAN/Apple domain profile. 326 409 IPR003609 -
Pste3g03740 813 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Pste3g03740 813 FunFam S-receptor-like kinase 5 566 770 - -
Pste3g03740 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 172 IPR036426 -
Pste3g03740 813 ProSiteProfiles Bulb-type lectin domain profile. 36 152 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03740 Pste-Chr3 29580843 29583284 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03740 470 771 Receptor kinase-like Gene Family AT5G20050 47.649 5.49e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste3g03740 Pkinase 4.9e-51 CL0016