Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03734 TTACTGTACTTTCTGACCAAGATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGACAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCACCCATTATTGAAAAGAAGGGTGTGGCTTGGGACATTTGGAACAGCTGAAGAAGCAGCAAGAGCATACGACGAGGCAGCCATTTTGATGTGTGGCAGAAACGCGAAAACAAACTTCCCAGTTACGGAAAATCACAATTCTGGTTCATCCTCTTCCTCAACATTTGCTTCAGCGCTCAATGCAAAGCTGAGGAAGTGCTGCAAGTCATCCCCTTCGCCTTCCCTCACTTGCTTAAGGCTTGACACTGAGAATTCCAACTTAGGGGTGTGGCAGAAGCGAGCAGGGTCTCGTTCTGGATCAAACTGGATTATGACAGTTGAGTTGGAAAGAAAAAATATTAAGGGTGGAGTTTCTGATTCACTGGTTTCGGTGCCTGAGAAGGTTGAAGGCAACAATGTTGGGTTGGATGAAGAGCAGAAGATTGCATTGCAGATGATAGAAGAGCTTCTGAATAGGAACTGA 552 0.4601 LLYFLTKMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFGTAEEAARAYDEAAILMCGRNAKTNFPVTENHNSGSSSSSTFASALNAKLRKCCKSSPSPSLTCLRLDTENSNLGVWQKRAGSRSGSNWIMTVELERKNIKGGVSDSLVSVPEKVEGNNVGLDEEQKIALQMIEELLNRN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03734 183 FunFam Ethylene-responsive transcription factor 2 12 72 - -
Pste3g03734 183 PRINTS Ethylene responsive element binding protein signature 36 52 IPR001471 GO:0003700|GO:0006355
Pste3g03734 183 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Pste3g03734 183 Gene3D AP2/ERF domain 12 72 IPR036955 GO:0003700|GO:0006355
Pste3g03734 183 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Pste3g03734 183 CDD AP2 12 72 IPR001471 GO:0003700|GO:0006355
Pste3g03734 183 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 130 - -
Pste3g03734 183 SUPERFAMILY DNA-binding domain 13 71 IPR016177 GO:0003677
Pste3g03734 183 Pfam AP2 domain 13 62 IPR001471 GO:0003700|GO:0006355
Pste3g03734 183 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03734 Pste-Chr3 29514534 29515240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03734 8 183 AP2-EREBP Transcription Factor Family AT1G15360 60.000 1.61e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste3g03734 AP2 4.4e-14 CL0081