Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03733 GAAAATCTCCTCAGTCTTTCTTATAGTGAGCTTCCATAATATGGATAACATTGTATTAAAGCTGACTAGTTTATACACCTTGCTGCTTCTTTTACTTTTTCTGTCTCATAAGCCTGCTCTTTCATTTTCTTCTAGACATAGCCAATATTGGGGTGGTGGGACAAAATTGACCTCTGGTGATAATGGTCATCTTGTGACTAACTTGCCTGGCCAGCCTAAGGCCAATTTCCAGCACTATGCTGGATATGTCACTGTCAATGAAACCAATGGAAGAGCACTGTTTTACTGGTTCTATGAGGCTATGACCAAGCCAGAAGAGAAACCATTGGTGCTTTGGCTTAATGGAGGTCCTGGGTGCTCTTCTGTGGGATACGGAGCAACACAGGAGATTGGTCCATTTTTAGTGGACACTGATGGCCAAGGCCTGAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCATACTCAAATACAAGCAGTGACTATGACCAATTGGGAGATGACTTAACAGCTAATGATGCTTACTCTTTTCTTCACAATTGGTTCCTAAAGTTTCCATCATATAGAACGACGACGTTTTACATAGCAGGGGAGAGCTATGCTGGAAAGTATGTACCAGAGCTGGCTGAGCTCATCCATGATAGGAACAAGGACCCCTCCCTCTATATTGATCTCAAGGGTATTTTGTTGGGTAACCCTGAAACATCTGATGCTGAGGACTGGATGGGACTGGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCATCAAATAATCAAAACAAGTTGTGACTTTAACAGCAGTGATCCATGGAGAAATGAAGATTGTAGTCAAGCCGTGGATGAAGTACTTAAACAATACAACGAAATTGACATCTACAGTCTCTACACCTCTGTCTGCTTTGCCAGTACAGCAAGTTCAAATGATCAATCCACTCAAACTTCGATGAAACGTTCATCTAAAATGATGCCTAGGATGTTGGGTGGCTATGATCCCTGCCTTGATGGCTATGCTAAAGCATTTTATAATAAACCAGATGTTCAGAAGGCTCTCCATGCTAGTGATGGTCACAATCTAAAGAATTGGAGCATTTGCAACGACAAGATATTCAATGATTGGGCTGATTCAAAGCCATCTGTCATCCCAATTTACAAGAAGCTTATTTCATCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGAAGAGTACCAGTGCTGTCCACAAGGTACAGCTTAAGCTCTCTTGCGTTGCCTGTCACTAAATCATGGAGGCCTTGGTACCATGACAATGAGGTTAGTGGATGGTTCGAAGAATATGAGGGGCTTACATTTGCAACGTTTCGAGGAGCTGGGCATGCAGTTCCCTGTTTTAAACCAAGCAACTCACTTGCGTTCTTCTCCTCCTTTCTCAATGGAGAATCACCACCTTCTACGAAATAAGAAATATCTATAATCATATTGGGTGTTGTGTGGCCCCATATGAAGATTTTGCTCTTATATTAATTAGCAATAGCTAATAGTCC 1578 0.4176 MDNIVLKLTSLYTLLLLLLFLSHKPALSFSSRHSQYWGGGTKLTSGDNGHLVTNLPGQPKANFQHYAGYVTVNETNGRALFYWFYEAMTKPEEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTSSDYDQLGDDLTANDAYSFLHNWFLKFPSYRTTTFYIAGESYAGKYVPELAELIHDRNKDPSLYIDLKGILLGNPETSDAEDWMGLVDYAWSHAVISDETHQIIKTSCDFNSSDPWRNEDCSQAVDEVLKQYNEIDIYSLYTSVCFASTASSNDQSTQTSMKRSSKMMPRMLGGYDPCLDGYAKAFYNKPDVQKALHASDGHNLKNWSICNDKIFNDWADSKPSVIPIYKKLISSGLRIWVYSGDTDGRVPVLSTRYSLSSLALPVTKSWRPWYHDNEVSGWFEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSSFLNGESPPSTK 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03733 484 FunFam Carboxypeptidase 383 477 - -
Pste3g03733 484 Gene3D alpha/beta hydrolase 47 305 IPR029058 -
Pste3g03733 484 Gene3D - 336 372 - -
Pste3g03733 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Pste3g03733 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Pste3g03733 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 144 IPR001563 GO:0004185|GO:0006508
Pste3g03733 484 PRINTS Carboxypeptidase C serine protease (S10) family signature 145 155 IPR001563 GO:0004185|GO:0006508
Pste3g03733 484 SUPERFAMILY alpha/beta-Hydrolases 49 478 IPR029058 -
Pste3g03733 484 ProSitePatterns Serine carboxypeptidases, serine active site. 195 202 IPR018202 GO:0004185
Pste3g03733 484 Gene3D - 383 477 - -
Pste3g03733 484 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 51 464 IPR001563 GO:0004185|GO:0006508
Pste3g03733 484 FunFam Carboxypeptidase 46 305 - -
Pste3g03733 484 Pfam Serine carboxypeptidase 57 477 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03733 Pste-Chr3 29497392 29501614 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03733 339 478 Calmodulin-binding Proteins AT2G22960 34.752 1.03e-18 82.4