Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03716 ATGGCAGAGGAAATGGCAAGTGAGATATTTTACTCTGTATCTCAGAGGATGCAGTCAGAAGAAGCAAAACATGACATATATTTCAAAGTTAGCAAACCTGTTACTCTCAAGTTTGAAGATGTTGTGCATAAAATAAAAAGTAGCAAAGGGAAAGGCTTGTTATGGGAAAAGGAGGTAGGTTTGGAGGAGACACTAGTGTTGAAAGGGGTCAGTGGAGTTACTTTTCCAGGTGAAATTTTAGCCATTTTGGGCCCTTCTGGTTGTGGTAAAACAACTCTGTTAACAGCATTGGGAGGCCGTTTAAATGATGGTATCACTAGAGGAAGCATAACCTACAATGGCAAACCCCTCTCAAACTCAGTAAAGCAAAACTTGGGATTTGTTGCTCAACATGATGTTTTCTATCCTCACCTATCAGTCAGTGAGACACTAGTGTTTTCGGCTCTTCTTCGCTTGCCAAATAGTGTCTCTAAAGAAGAGAAAATCTTAAAAGCGCAGGCAGTTATGAATGAACTTGACCTGACTCATTGTAAGGACACTATAATGGGAGGGCCTAGTCTAAGGGGAGTTTCAGGTGGAGAGTGGAAAAGAGTTAGCATAGGGCAACAACTATTAGTTAATCCAAGTCTTTTGATAGTTGATGAACCCACTTCAGGTCTTGACTCAACCACAGCTAGAAGAATTGTGCTAACTCTCTGTAAGTTAGCTGAAGATGGAAGGACTGTTATAATGACTATACACCAGCCTTCCAGCAAATTGTTTTACATGTTCCAGAAGATTTTGCTATTATCAGATGGTAGAAGCTTGTACTTTGGGAAAGGAGAACATGTTATGAATTACTTCTCCACTATCGGTTATTCTCCATCTATAGCTATGAATCCAACAGATTTCTTAATTGATCTTGCAAATGGCATTCATTCCGAAAATTTGGAAGTGGATACAAATTCTACAAAACAAGTGTTATTAGCTGCTTTCGAGAGTAACCTTGGGTGCCAAGTGAGGTTGGAACTTCAAATGTCCAGGGATTCATTTCATCACAATTCAAAAGATGAGATGTTTGCTAAACGTTGCACAACTTGGTGGCAGCAGTTTACTATATTACTAAAAAGGGGTTTCAAAGAAAGAAAGAATGAACAATTTTCAGCCCACAAAATCTGGCACGTTTTGGCCTTATCATTCTTTTCAGGCTTTCTCTGGTGGCAGTCTGGAGTTGATCAAATGCAAAACCGGGTATCACTACTTTTCTACTATACACAATTTGGTGGATTCTTCCCTATGGTCCAGTCCATCTTTACCTTTCCTCTTGATCGAAAAATGATAATAAAGGAAAGGTCCTCTTACATGTATAGACTCTCATCTTACTTCATAGCAAGTACTCTTGTTGACCTTCCTTTGCAGCTTGCCTTGCCAACCCTTTTTGTCATCATTACTTATTGGATGGGAGGGCTTAAAGCCAGTGCTTCAATTTTCTTTGAAACTCTTGCTGTTGCTCTTCTCTATGCTTTGGTATCACAAGGTATTGGCCTAGCTATTGGTGCAGTGCTGGTAAATAATATAAAAATGGTTGCTACAGTTGGAGTTGTTGCTATGACATTATTTGTTTTAGTTAACGGCTTCTTTGTTCAAAATACGCCAGCATTTGTATCCTGGATAAAGTACATATCTCATAGCTATTATTCCTATAAGCTCTTGCTAGGATCACAGTTTAAGGATTATGACACTTACCATTGTGGTCCAAATGTCACTTGCTCAGTTAGGAACTACCCTACTATTAAGCATGTAGGCGTTGACAAGCATAGTTTCTCCGTAGCAGCTTTGGTGGCAATGCTTGTAGGTTACAGACTTATTGCCTATTTTGCCCTTATGATTGGAACTAAACAAAACTAA 1887 0.3916 MAEEMASEIFYSVSQRMQSEEAKHDIYFKVSKPVTLKFEDVVHKIKSSKGKGLLWEKEVGLEETLVLKGVSGVTFPGEILAILGPSGCGKTTLLTALGGRLNDGITRGSITYNGKPLSNSVKQNLGFVAQHDVFYPHLSVSETLVFSALLRLPNSVSKEEKILKAQAVMNELDLTHCKDTIMGGPSLRGVSGGEWKRVSIGQQLLVNPSLLIVDEPTSGLDSTTARRIVLTLCKLAEDGRTVIMTIHQPSSKLFYMFQKILLLSDGRSLYFGKGEHVMNYFSTIGYSPSIAMNPTDFLIDLANGIHSENLEVDTNSTKQVLLAAFESNLGCQVRLELQMSRDSFHHNSKDEMFAKRCTTWWQQFTILLKRGFKERKNEQFSAHKIWHVLALSFFSGFLWWQSGVDQMQNRVSLLFYYTQFGGFFPMVQSIFTFPLDRKMIIKERSSYMYRLSSYFIASTLVDLPLQLALPTLFVIITYWMGGLKASASIFFETLAVALLYALVSQGIGLAIGAVLVNNIKMVATVGVVAMTLFVLVNGFFVQNTPAFVSWIKYISHSYYSYKLLLGSQFKDYDTYHCGPNVTCSVRNYPTIKHVGVDKHSFSVAALVAMLVGYRLIAYFALMIGTKQN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03716 628 Gene3D - 56 284 IPR027417 -
Pste3g03716 628 CDD ABCG_EPDR 33 272 - -
Pste3g03716 628 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 617 - -
Pste3g03716 628 ProSitePatterns ABC transporters family signature. 190 204 IPR017871 GO:0005524|GO:0016887
Pste3g03716 628 SMART AAA_5 76 267 IPR003593 GO:0016887
Pste3g03716 628 Pfam ABC-2 type transporter 362 569 IPR013525 GO:0016020|GO:0140359
Pste3g03716 628 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 284 IPR027417 -
Pste3g03716 628 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 290 IPR003439 GO:0005524
Pste3g03716 628 Pfam ABC transporter 67 218 IPR003439 GO:0005524
Pste3g03716 628 Pfam ABC-2 type transporter 247 315 IPR043926 GO:0140359
Pste3g03716 628 FunFam ABC transporter G family member 22 55 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03716 Pste-Chr3 29366745 29369749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03716 77 278 Calmodulin-binding Proteins AT2G36910 26.168 8.91e-10 60.1