Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03705 TGCGAAGAGTTCGATCAGCGCGCTGATTTTGGTTTGCTTTTTGGAAAGAAAGAAAAACAAAGCAGCAAAACAGAGTGTTTCTGTCACCATCTGTATGCACTTTGGAACCATCTCTTCTTTTTTTCATTCTCCACTCTTCCCACAGTTCAGCTTTATTTGCCTCTGATCACCAAAGGCATTGTAAAAAGCTCCTGTGAGTGGCAAACGGATACTTTGGAAGAAATGGGTTGTGCGAATTTGGAGTTGAATTTGCAAATTTTGATCTTGTCATTGTTGATTTTCGCTGCAAGTTTCTGTGCTGGGGACACTGACCCACTTGATGTTGCGGCAATCAATAGTTTGTATGTAGCTCTTGACTCACCACCCCTTGAAGGATGGACAGCCGAAGGAGGAGATCCGTGCTTGGAACAATGGCAAGGTGTGAATTGTGTCTTCTCCAACATAACTGCCTTACGGCTGGGAGGCATGAATTTAACTGGACAGCTGGGAAGGAATTTGGATTTCGCATCTATCATAGAAATAGATCTTAGCAACAACCTGATTGGAGGGACCATTCCATCCACTTTGCCCCCTACGTTGAGGAACTTGTCACTGTCAGCTAATCATTTAAATGGAAGCATTCCCGATGCCTTATCCTCATTAACTCAATTGTCAGACTTGTCATTAAAAGATAACCATCTGAATGGACAAATCCCAAATGCGTTTCTACAGCTCACTGGTTTGATTAATATGGATCTGTCTGGTAACAACTTGAGTGGTCAGCTGCCTCCCTCAATGGGGAATTTGTCATCTCTTATCACATTACACTTGCAGAACAATCAACTTTCTGGGACCCTTTTTGTTTTGCAGGACCTCCCTCTTCAGGATCTGAATATAGAGAACAATATATTCTCTGGGCCAATTCCTCCAGAGTTGTTGAGTATCCCTAATTTCAGAAAAGATGGGAATCCATTTAATACCACCATCATTCCATCACCTCCAGCTGCTTCCCCTGCACCTGTTGCTATGGCTCCTTCCCCAAAAATGCCCCCTTGGAAAGTCAAAGATAATCCCTCTGATACTGTAAAAGCACCAATACCTGCAATTGCTGAGAGGTCTTTCAAAACTAAGAAATTAATTTGGATTGCTGGTGCAGGCTTTTTAATATTTATTGCAGCAGGAATTTGTTTTCTAATGTTGTGGTGCTTTAAGAGAAGACAAGAGAATAAGACTGATAAGAAACACAACATGAATGTATATAAATGTAGAAGCAGTGACTCCTCTTTTGAAGCAACTAATGATGAGAAGAAAGAATGCATTAATGTTTTTGAATTAAACCACACAGGATGGGCTTCCAAACTTCCACCTTTGCAGCCAGCACCACCACATTATCTCCCAATTATTCCTGGAGAGAATTTAATTATCAATCGACCTATATCTACCAAGGTAACTGAAAGACAAATTATGACAAATTCCATGGAAGTTTACACTGTTGCATCACTTCAGCAGTACACAAATAGTTTTTCCCAAGAAAATTATATAGGGGAAGGCATGATTGGTCCTGTTTATAGGGCTGAACTCCCTGATGGAAAGTTACTAGCAGTTAGGAAGCTGAACACTACTGCTTCTATGGGGCAAAATTGCGAACAGTTTGTTAAATTAGCTTCCAGTATCTCCAAAATTCAACATGCTAATATTGTAAAGCTTATGGGCTACTGTGCTGAGTATAGCCAACAATTACTTGTACATGAGTATTGCAGTAATGGGACGCTACATGATGCATTGCATACAGATGATAAACTTCAGATTAAACTTTCATGGGATGATCGCATTCGGATGTCACTTGGAGCAGCAAGAGCTTTACAGTATTTACATGAGCATTGTCAACCACCTATTATGCACCGAAACTTTAGGTCTGCCAATGTACTCCTCAATGACAAGATGGAAGTATGTGTCTCTGATTGTGGATTAGGTTCTTTACTATCTTCAGGCTCTGCTAGTCAGTTGTTGGGACGCTACCTCACATATAATGGTTACAGTGCTCCAGAATTTGAGTATGGAAGTTATACAGTGCAAAGTGACATCTTTAGCTTTGGAGTAGTAATGTTAGAACTCCTCACTGGACGAAAATCCTATGACAGCTCACGGCCTCATGGAGAACAATTTTTGGTGAGATGGGCGGTCCCTCAACTCCATGACATAGATGCATTGTCCAAAATGGTTGACCCCTCCTTGAATGGAGAATATCCCAAGAAATCCTTGTCACGTTTTGCAGACATTATTTCTTCATGCATACAGCATGAACCTGAATTTCGACCAGCAATGTCAGAAATTGTTCAAGATCTCTTGCGAACGATGTAAAGGATTGTGTACTTGTGTAGCTGCTAATGAGGTGACGAACTGCCTTAGGTAGCAAAAGAAGCTTTGGTTATCAATTTTTC 2420 0.4087 CEEFDQRADFGLLFGKKEKQSSKTECFCHHLYALWNHLFFFSFSTLPTVQLYLPLITKGIVKSSCEWQTDTLEEMGCANLELNLQILILSLLIFAASFCAGDTDPLDVAAINSLYVALDSPPLEGWTAEGGDPCLEQWQGVNCVFSNITALRLGGMNLTGQLGRNLDFASIIEIDLSNNLIGGTIPSTLPPTLRNLSLSANHLNGSIPDALSSLTQLSDLSLKDNHLNGQIPNAFLQLTGLINMDLSGNNLSGQLPPSMGNLSSLITLHLQNNQLSGTLFVLQDLPLQDLNIENNIFSGPIPPELLSIPNFRKDGNPFNTTIIPSPPAASPAPVAMAPSPKMPPWKVKDNPSDTVKAPIPAIAERSFKTKKLIWIAGAGFLIFIAAGICFLMLWCFKRRQENKTDKKHNMNVYKCRSSDSSFEATNDEKKECINVFELNHTGWASKLPPLQPAPPHYLPIIPGENLIINRPISTKVTERQIMTNSMEVYTVASLQQYTNSFSQENYIGEGMIGPVYRAELPDGKLLAVRKLNTTASMGQNCEQFVKLASSISKIQHANIVKLMGYCAEYSQQLLVHEYCSNGTLHDALHTDDKLQIKLSWDDRIRMSLGAARALQYLHEHCQPPIMHRNFRSANVLLNDKMEVCVSDCGLGSLLSSGSASQLLGRYLTYNGYSAPEFEYGSYTVQSDIFSFGVVMLELLTGRKSYDSSRPHGEQFLVRWAVPQLHDIDALSKMVDPSLNGEYPKKSLSRFADIISSCIQHEPEFRPAMSEIVQDLLRTM 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03705 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 579 779 - -
Pste3g03705 779 SUPERFAMILY L domain-like 106 310 - -
Pste3g03705 779 ProSiteProfiles Protein kinase domain profile. 501 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03705 779 Pfam Protein tyrosine and serine/threonine kinase 504 775 IPR001245 GO:0004672|GO:0006468
Pste3g03705 779 Gene3D Phosphorylase Kinase; domain 1 465 578 - -
Pste3g03705 779 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 469 578 - -
Pste3g03705 779 SUPERFAMILY Protein kinase-like (PK-like) 480 775 IPR011009 -
Pste3g03705 779 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 104 329 - -
Pste3g03705 779 Gene3D Ribonuclease Inhibitor 91 325 IPR032675 -
Pste3g03705 779 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 90 776 IPR046959 -
Pste3g03705 779 Pfam Leucine rich repeat 191 251 IPR001611 GO:0005515
Pste3g03705 779 Gene3D Transferase(Phosphotransferase) domain 1 579 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03705 Pste-Chr3 29288127 29295368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03705 93 776 Strubbelig Receptor Gene Family AT4G03390 51.486 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pste3g03705 PK_Tyr_Ser-Thr 1.1e-40 CL0016