Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03699 CTTACACGACATTCCGGATTGTCGTCCATTGCTGTTGTATGATATGATGTGTCCTTTCAATTTTATTTTATTTTTATTTATTTGTTTTTTCATTTTACTTCATGCTTCCTCCCTCTTTCAATCCATCTCCTAACATTTAATTAACCTTTATTATTTTCTTTTCATCTCACAAACCAGAAATCAAAACCGCCACTCATCTGAAATTCTCCGCCGGAAAACCACCCCAACCCCTTTGTCCCTCCTTTTCTCGTACCCACATCCCCGAAAGCGGTTTTCCGACACCCATAAACCGGTTTCCTCGTTCCATTTCCGTTGTGTCTGTTATTTTTTTATTCTCCGTCGCCGTGGGGTTAGTCGGGCGAGTAGCGTTTTTTTTACGAGGGCGGTGTTTGCCAACGTGAGCCGCGAGCGTAGGATTAGGAACTTAAAAAACAAGAAAAACAAGTTAGTCGCGTTTGTTTTAATCTGGAGCCTACACGTGTACGACGATTGGAGCGGAGACGATGGTGACGTGGAGCACCTGGGAGGAGCTTCTCCTCGGTGGAGCTATTCTCCGGCACGGAACCCGAGATTGGTCCGTTGTTGCCGCAGAACTCAAGACCCGAACCGTTTCATCATGCATTTTCACACCCCAGGTATGTAAAGCCAAATATGAAGAGTTGCGAAAGCAGTATTCTGGATGCACGGCTTGGTTCGAGGAGCTTAAGAAGAAAAGAGTTGCAGAGCTTAAGAGAGATTTGGAGCTATCTGAAGAATTAATTGGGTCCCTTGAGTTGAAGCTTGAATCCCTTCAGGTTGGGAAGGATGAGAAAAAGGATGATGATTACCATGTTGACAATGGCTCAGTTGGACGAGAGTTACATGTTCCTTCTTCAAAATTGGATAGAGTCGATGCTTCTGCGAAAGAGATGTCAAAGGATGGGTTATCTGCTGGGAGTTTCACACATGAAACTAAGACAAACTGGACTCATGAATGCCAAGTTCCAGCAATGTCTTGTGAGGATATGGAGACCAAGCCTGAAGTTTCAGGGTCTTCGGAACAGGACAAAGGTTTGAATGTAGATAAGTCAGCTCACACTATATATGAAGGACAGGGAGGATGTTTGAAAAAACGGAGAGGGAAGAGAAAGAGGAAGGATTGTGGAAGAAATATGAATGAAGTAAGTGTAAGAGAAAGTGATTTTTCAGCCGATGTGTGTAAAGAAAGTTCTACCAGCAACTGTGGTGAGATTGTCAAATCTTCGGGTATAAATGAGAATAATGCAAATTTGAAGAAGGATGGATTAAAAGATTTGCTGCAGGTCTTGGATTCTTTTTTGGTAGTTCAAGGTGCTTCTACCTTCTCTCATAGGCATGATAGCCAGAAGCGAGGAAGATACAAGAAATTGATCCGTCAGCACATGGACTTTGACACAATAAGGTCAAGAATCAGCAACAAAACAATCAAGTCCATGGTGGAGCTCTTGAGAGACTTACTACTACTGGCCAACAATGCTATAACATTCTATTCCAAGATCACTCGTGAATACAAAACCGCTATACAACTAAGAGACCTTGTGATCAAAACATTGACAGAGAAACTCGAGTGTTCTAGCACATCACCGCTGCATGATCCTTCAGTGAAGGTCAGAAGCATGCGCCCAGGTAACCGCAAGATTGTTGCAAAGGTAGCTGGTGGCAACACCTCTGCTGAAAGGGTTTCACTTGGAGCTAAGAAAGCTAACAAAGTGAATTCTCCGCCTTCAGTGGAATCCTTGCCTATTAAGAAAGCTTTTGGTAGTAGAACAAAAAAGGTTGCACGTGAAAGTGCTGGTCAGAGACATGCAACACCAAGGAATGAAAAGAAAAGGAGGAGAGCAAAGTGAGGACTTGGCCCTCTTAAAGGTCTCTTTGTACAAAAAAAATCCCTTTTTTTGTTTGGGTACCGTACAGAAGGGTGAACTTTCATGCAATCAGAAGG 1960 0.4306 MVTWSTWEELLLGGAILRHGTRDWSVVAAELKTRTVSSCIFTPQVCKAKYEELRKQYSGCTAWFEELKKKRVAELKRDLELSEELIGSLELKLESLQVGKDEKKDDDYHVDNGSVGRELHVPSSKLDRVDASAKEMSKDGLSAGSFTHETKTNWTHECQVPAMSCEDMETKPEVSGSSEQDKGLNVDKSAHTIYEGQGGCLKKRRGKRKRKDCGRNMNEVSVRESDFSADVCKESSTSNCGEIVKSSGINENNANLKKDGLKDLLQVLDSFLVVQGASTFSHRHDSQKRGRYKKLIRQHMDFDTIRSRISNKTIKSMVELLRDLLLLANNAITFYSKITREYKTAIQLRDLVIKTLTEKLECSSTSPLHDPSVKVRSMRPGNRKIVAKVAGGNTSAERVSLGAKKANKVNSPPSVESLPIKKAFGSRTKKVARESAGQRHATPRNEKKRRRAK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03699 453 CDD SANT 3 40 IPR001005 -
Pste3g03699 453 Coils Coil 72 92 - -
Pste3g03699 453 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 3 231 - -
Pste3g03699 453 SMART bromo_6 257 361 IPR001487 GO:0005515
Pste3g03699 453 Pfam Myb-like DNA-binding domain 3 40 IPR001005 -
Pste3g03699 453 ProSiteProfiles Bromodomain profile. 280 342 IPR001487 GO:0005515
Pste3g03699 453 MobiDBLite consensus disorder prediction 427 442 - -
Pste3g03699 453 Gene3D - 225 366 IPR036427 GO:0005515
Pste3g03699 453 SUPERFAMILY Homeodomain-like 3 40 IPR009057 -
Pste3g03699 453 ProSiteProfiles SANT domain profile. 1 40 IPR017884 -
Pste3g03699 453 CDD Bromodomain 258 356 - -
Pste3g03699 453 SUPERFAMILY Bromodomain 261 362 IPR036427 GO:0005515
Pste3g03699 453 MobiDBLite consensus disorder prediction 402 453 - -
Pste3g03699 453 Pfam Bromodomain 265 345 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03699 Pste-Chr3 29226103 29230528 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste3g03699 Bromodomain 6.3e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03699 3 29226103 29230528 Pste2g01917 2 19507622 19508097 PCT