Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03678 ATGTTTGATCCTGGACGTGTCTTATTTCTTGTTTTTATGCTTGCTTCTGAACAGGTTAGTGAAGAAGTTGAGCGTGCTTTGGCAAAACTGAACCCTGCCAAGCTTGCTGCCAAGTCTTCATCCCCGAAGAAAATAGAAGGCCCTGATGGCAAAAATTTACAATTGCACTTCAAGACGAGGCTGTCCCTTCCCCTCTTTACTGGCGGGAAAGTGGAGGGTGAACAAGGTGCAGCAATACATATTGTTTTGATAGATGCAATCACTGGCCACATTGTCAGTTCAGGGCCAGAGTCGTCTGTTAGGCTAGATGTTATTGTACTAGAGGGAGATTTCAATAATGAGGATGATGATCATTGGAACGAAGAAGAGTTTGATAGCCATATTGTCAAAGAGCGGGAAGGAAAAAGGCCACTTCTAACTGGTGATCTACAAGTCACACTGAAGGAGGGTGTAGGAACACTGGGTGAGCTTACATTTACAGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGATTGGGGCTGAAAGTTGCCTCTGGTTGTTGTGAGGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACCGTTAAGGATCATCGTGGAGAATTATATAAGAAACACTACCCGCCTGCCCTGAATGATGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAATCTGGAATATATACTGTTGAAGATTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATGTAAGAATCCAGATTTTTATCCTTGGGAGCGGTATGTCAAATAAGATGTGGGATATTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGCAAACTTTACGTATACTATCCCGAGGATGCAAGAAATGTGGGTGTTGTTTTCAATAATATTTATGAATTAAGTGGCTTAATTGCCAACGACCAATATTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGATTTATGTAGACACATTGGTGAACAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCACTGATAAATGACAGTCAAGATAAGACTTTGGATACCGCTCCTCCTCAGGCTACAATGACTTCCCATGAATATTCAAACTCACTTCAGCAGATATCCATCCCAGCTTTGCCACTTCCAGTAAACGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGGGACGACTTCCAGATTCTCCTTGCAAACGCAGAATCCTAGTCTTAATTCTTCCATTCAGTTTGATGACAATGCATTTCCTCTACAAAACCAGTTGATGAGTGTTTCACACCAAACCCAACTTCCAAGAAATGAAAATGGGCTGACTCTTGGTCCTCCACAATCATCTACTCATGGCTTTGATCCTGTCAGCATTTCTAATCCTACTTATAGAGGAGTTGAAGAGTACTTCCCAGAGGAGGAAATTCGTATTAGAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCATCTACTCCGTATTTTTAACATGGGTGGCCAACCAAATCCTTCCTTTAATGTTCATGAAGAAGGGTACCCTAGTTCATCTGCATACATTTCTGCTAATCCCATGGGCTATAATTTTGATGAAGAACCAAACCGCTCCTCAGGCAAAGCTGTTGTGGGCTGGCTCAAGCTGAAGGCAGCTTTAAGATGGGGTATTTTTATTAGGAAGCAGGCTGCTGAGAGACGGGCACAACTTGTTGAGTTGGATGACCCGTAGAGATCTTGGTGCATTAGTGATCTTTAATGATCTGAGCAGTAACTTTTTTGGTTATGGCATCCAAGGCTTCTTTCCTGACATTCAGAATTGTTGCCATGCTGAAATTTTATAGCATGAACAAGGATATGAAATCTGGATTGAATTATTTGGTGCTGACTTAACTTAAAGATTCCATTGTTCCTTGATCCATAAACAGTTGTTTATAGACATCTGCCTATAGAAGAGTATCACTCTGTAATATTTCCTCGGTAACTGCTTTGCTTCTGATATTGTCACTAAGCATTCCTGCATCCAAATTGTAAAGGTTCGCCGGTTTGCTTGTTTTTAAACAAAACAGTGTTGCTGCAATTCTGCTTAAACTTGACAAGCTCTAAGTGAAATCAGAAGAAGCTAGGATCTTTACTACACTACCAGATTGTATTCAATTCTGTACAGTAAGCTAGCTAAATGATGTTCAACCCAATTGAAGCCTTATGTTTTGTAGTTACTCTGGCATTGTAATAATTATAATTGATTTGAACTGATATGTACTTCGAGTACTTTTGTTTGTTGCCGTGTAATGTATTATTGTTTCAGCATCTGTGTCTTAGTTATTAATTGATTCGATATTCTCGTG 2398 0.4053 MFDPGRVLFLVFMLASEQVSEEVERALAKLNPAKLAAKSSSPKKIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGAAIHIVLIDAITGHIVSSGPESSVRLDVIVLEGDFNNEDDDHWNEEEFDSHIVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKSGIYTVEDFLRLVVRDPQRLRNVRIQIFILGSGMSNKMWDILVEHAKTCVLSGKLYVYYPEDARNVGVVFNNIYELSGLIANDQYYSADSLSENQKIYVDTLVNKAYDNWMHVIEYDGKSLINDSQDKTLDTAPPQATMTSHEYSNSLQQISIPALPLPVNAGQPSMDSGVTVGGYHDGTTSRFSLQTQNPSLNSSIQFDDNAFPLQNQLMSVSHQTQLPRNENGLTLGPPQSSTHGFDPVSISNPTYRGVEEYFPEEEIRIRSNEMLENEDMQHLLRIFNMGGQPNPSFNVHEEGYPSSSAYISANPMGYNFDEEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03678 593 Pfam Calmodulin binding protein central domain 212 284 IPR046830 -
Pste3g03678 593 Pfam Calmodulin binding protein-like N-terminal domain 53 200 IPR046831 -
Pste3g03678 593 Pfam Calmodulin binding protein C-terminal domain 289 351 IPR046829 -
Pste3g03678 593 PANTHER OS02G0177800 PROTEIN 14 508 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03678 Pste-Chr3 29058278 29062361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03678 19 588 Calmodulin-binding Proteins AT5G57580 60.500 0.0 684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03678 3 29058278 29062361 Pste2g01894 2 19290600 19296991 PCT