Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03656 ATGAAAATGAGAAGGTGTCACCGAGGCAAGCATCCTAGGACACCCTCCTTTGCCTTATACAGTGCTAAAAACCATGCAGCCACTCTAGAAGATGTTGACCGTTTCCTCTTTGAGAATTTCAAGTCTTTATGCCTGAAAGAGGAAGAGGAAGAAACCCAAAAGGAAGAAGAAACATCCACAGTGTTCTCGTTCTCAGAGTCCTCGACCATGATGAATACAAATACAAGTGACGATGTTTCGTCTTCCAATTACTACCACAAGGATCCTGCGCTTCCCGATAATAGCATCGCGCTCTTGGTGCACTCCACCAGCCCCTACCAGGACTTCACCCGTTCCATGCAACAAATGGTTAACAACCATCAAAGCCTTGTGGATTGGAATTTCATGGAGGATCTCTTGTTTACTTACCTCAACCTCAATCCCAAAACCTCCCACAAGTTCATCCTCACTGCTTTCGTCGATCTCGTCAACCTCATGCGTCGTCAACCACCTTCACCTTCGCCCTCACCCTCCCACATCCCCCGTAGCGTTCGAACTGTTAGGACTGCTCAGAGCTATGGAATACGTCCACCAAAAACGTAA 582 0.4725 MKMRRCHRGKHPRTPSFALYSAKNHAATLEDVDRFLFENFKSLCLKEEEEETQKEEETSTVFSFSESSTMMNTNTSDDVSSSNYYHKDPALPDNSIALLVHSTSPYQDFTRSMQQMVNNHQSLVDWNFMEDLLFTYLNLNPKTSHKFILTAFVDLVNLMRRQPPSPSPSPSHIPRSVRTVRTAQSYGIRPPKT 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03656 193 Pfam Transcriptional repressor, ovate 102 157 IPR006458 -
Pste3g03656 193 NCBIfam uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
Pste3g03656 193 ProSiteProfiles OVATE domain profile. 96 158 IPR006458 -
Pste3g03656 193 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 159 IPR038933 GO:0045892
Pste3g03656 193 MobiDBLite consensus disorder prediction 162 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03656 Pste-Chr3 28823514 28824095 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pste3g03656 Ovate 5e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03656 3 28823514 28824095 Pste3g03656 3 28823514 28824095 ECH
Pste3g03656 3 28823514 28824095 Pste6g00648 6 2433001 2433965 PCT