Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03655 CGAAAGGCATCACCTCTAGGCCTAGAACACACGCCGTTCTTGCCTGCTTCGTAACTTCCTCTTTCTCCAACTGTCCCACCTCTCTGGATTCTCGTTGACCTTATTCTCATACAAACACACCAAACCAAATTCATCTCTCTCTCTCTCCGTCCCTTCCCGCAATTTCGGACACTCCCACCGTAACAGAAAATGCGGACTTTCACTTTCTTCCAACGACTTTCTAGAGCTTTCCGTGACCATGGCTCCAACCTCAAGCTTGTACTCCTCTGCACCACCGTAAGTGGTGGAGGGCTTTTGGCTTATGGAGAGGCTGTTGGAGCATCTGAAGCCGCGGTAACGGAGAAGAAAAAGGTGGTGGTGCTGGGAACAGGGTGGGCAGGCACGAGTTTCTTGAAGAATCTGAACAATCCCAGATATGAGGTTCACGTGGTGTCGCCTCGCAATTACTTTGCATTCACTCCTTTGCTGCCCAGTGTTACCTGCGGCACCGTCGAAGCACGCAGCATTGTCGAACCGGTCCGCAATATTTTCAGGAAGCAAAAGATGGACGTTCAGTTCAGTGAAGCAGAATGTCTCAAAATTGACGCAGCAAACAGGAAGGTTTACTGTCGATCTAATATAAATAGTAATACGAACGAAAAAGAAGAATTTGTGGTGGACTATGATTACCTAATCATAGCAGTGGGAGCAAATGTCAACACATTTAATACTCCTGGAGTGACGGAAAATTGTCATTTCTTGAAGGAAGTTGAAGATGCACAGAAGATTAGAAGAACTGTTATTGACTGCTTTGAGAGAGCAAGTTTGCCTAGTGTAAGTGAAGAAGAAAAGAAGAGAATTCTTCATTTTGCTATTGTTGGAGGTGGTCCAACTGGAGTGGAGTTTGCAGCCTCACTACATGACTTTGTCACTGAGGATTTGGTCAAGATATATCCTGGGATAAAAGATCTAGTTAAAATTACACTTCTGGAGGCTGGAGATCATATTTTGAGCATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGAGAAGTTCGGAAGAGATGGTATTGATGTGAAAACTGGATCCATGGTTGTGAAGGTATCTGAAAAAGAAATTTCTACTAAAGAAATGAAAAATGGAGGAGCAATAACTACAATTCCATATGGAATGGCTGTCTGGTCAACTGGTATCGGCACTCGTCCATTTATAAAAGATTTTATGTCACAAATTGGTCAGACTAACAGACGCGCCATAGCTACTGATGAATGGCTGAGAGTTGAAGCAACTAACAACGTGTATGCACTTGGTGACTGTGCTACAATAAACCAGCGGAAAGTCATGGAAGATATTGCGGCAATATTTAAAAAGGCTGACAAAGACAATTCAGGAACTCTTACTGTCAAAGAATTTCAGGAGGTATTGGATGACATTTGTGAGAGATACCCTCAGGTGGAGCTATATCTAAAGAGTAACCAGATGCATGACCTTGCTGATTTGTTGAAAGAGTCCATTGGAGATGTTGAAAAGGAATCCATTGAACTGAATATCGAAGAACTCAAATCTGCACTTTCTAAAGTGGATTCTCAGATGAAATTTCTTCCTGCTACAGCTCAGGTTGCATCCCAGCAAGGCACTTACCTCGCCAAGTGCTTTAACCGGATGGAAGAGTGTGAGAAAAATCCAGAGGGTCCTATCCGGTTCAGGGGAGAAGGGCGCCATCGCTTCAAACCCTTTAGGTACAAGCATTTAGGTCAATTTGCTCCTCTAGGAGGAGAGCAAACAGCTGCACAACTTCCTGGGGATTGGGTTTCAATTGGACACAGTTCTCAATGGCTGTGGTATTCTGTCTATGCAAGCAAGCAAGTCAGTTGGCGCACTAGGGCATTGGTAGTATCAGACTGGACAAGACGCTTTATTTTTGGGAGAGATTCAAGTCAAATCTGAAAGAGTTTCAACATTTTCCTGAGACTTGCAGTGGCAATTTTGCAGAGCTCGTCAATCTTGAATTTCTATTGATATAGGAATTTCTTTTTCTTCCAATTCTCGATCTTTGAATAACTAAAAGCAGATTCCCAGCGGGATGTCCTAGGTGGGATTTGTTATCATGCTTTTGCGTCGTCATGTATGATTTTTGTTACATACCACTCCCACTTTTCTTTCATGCTTCTTCTATTGGAATTTCGACATTTGTATTCTCCGAGTTTTGCTTATTTATTTCGGAGATGCTCGGGGATGCCAGCTTGTCAAACCTTTTCGTTCTGAGTTATGGTTGAATAGTTATAATATTTTCCCTTTTCAAAATTTCTGCTCAAGGAAGCAACTATAATTTGTTAATGTAATGAGACACAACTGGAGTGATAGATAAAAATGTCCGGGCAATGTATGTACTTTGTATAAGCAGAGGTTGTAACATGTTTCTTCTGCCTTATTGTGTGAATCAATGAATGGATCCTGGAACAAATCAACATTTA 2453 0.4215 MRTFTFFQRLSRAFRDHGSNLKLVLLCTTVSGGGLLAYGEAVGASEAAVTEKKKVVVLGTGWAGTSFLKNLNNPRYEVHVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIFRKQKMDVQFSEAECLKIDAANRKVYCRSNINSNTNEKEEFVVDYDYLIIAVGANVNTFNTPGVTENCHFLKEVEDAQKIRRTVIDCFERASLPSVSEEEKKRILHFAIVGGGPTGVEFAASLHDFVTEDLVKIYPGIKDLVKITLLEAGDHILSMFDKRITAFAEEKFGRDGIDVKTGSMVVKVSEKEISTKEMKNGGAITTIPYGMAVWSTGIGTRPFIKDFMSQIGQTNRRAIATDEWLRVEATNNVYALGDCATINQRKVMEDIAAIFKKADKDNSGTLTVKEFQEVLDDICERYPQVELYLKSNQMHDLADLLKESIGDVEKESIELNIEELKSALSKVDSQMKFLPATAQVASQQGTYLAKCFNRMEECEKNPEGPIRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGHSSQWLWYSVYASKQVSWRTRALVVSDWTRRFIFGRDSSQI 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03655 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 44 405 - -
Pste3g03655 578 SUPERFAMILY FAD/NAD(P)-binding domain 52 271 IPR036188 -
Pste3g03655 578 SUPERFAMILY EF-hand 332 465 IPR011992 -
Pste3g03655 578 Gene3D - 44 416 - -
Pste3g03655 578 Gene3D - 419 577 - -
Pste3g03655 578 PANTHER NADH DEHYDROGENASE 46 578 IPR045024 GO:0003954|GO:0006116
Pste3g03655 578 ProSitePatterns EF-hand calcium-binding domain. 389 401 IPR018247 -
Pste3g03655 578 SMART efh_1 380 408 IPR002048 GO:0005509
Pste3g03655 578 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 378 IPR023753 GO:0016491
Pste3g03655 578 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 422 577 - -
Pste3g03655 578 Coils Coil 440 460 - -
Pste3g03655 578 ProSiteProfiles EF-hand calcium-binding domain profile. 376 411 IPR002048 GO:0005509
Pste3g03655 578 SUPERFAMILY FAD/NAD(P)-binding domain 214 373 IPR036188 -
Pste3g03655 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 47 - -
Pste3g03655 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 158 176 - -
Pste3g03655 578 PRINTS FAD-dependent pyridine nucleotide reductase signature 219 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03655 Pste-Chr3 28807829 28813715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03655 1 578 EF-hand Containing Proteins AT4G05020 71.268 0.0 888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03655 3 28807829 28813715 Pste2g01885 2 19219062 19224076 PCT