Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03637 GTCGACAGAGAGGAAGCATATTTAGTCCTTCAAATTGAAACGGAGGCACTCATCAATGGGCGCCGACATGTCCAACAATCAGCCTCAAACCTCTCACGCCAAAGACTTGTTTGCCTCCCCAGCTCTCTCTCTCAGCCTTGCTGGCATTTTTCGCCATGCTGGAGTGGCCCCCATGGAGGTCGAGGACGGCGACGAAGCCGAGAGGTTAGAGGAGATTAGCAGCGAGAACTCCGGCCCCACCAGATCCAGATCAGACGATGATTTTGAAGAACCCGACTATGATGACGGACTCGGAGACAAGAACAAGCCCAAAAAGAGGAAGAAATATCACAGGCACACTGCTCAGCAGATCAGAGAAATGGAAGCCCTTTTCAAAGAGTCACCACATCCTGATGAAAAGCAGCGGCAACATCTTAGCAAGCAATTAGGCCTCGCCCCAAGGCAAGTCAAGTTTTGGTTCCAGAATCGTCGTACCCAAATCAAGGCAATACAAGAGCGTCATGAAAATTCTTTGTTGAAATCAGAAATAGACAAACTAAAGGACAAAAATAAGACCTTACGAGAAACCATCAACAAAGCTTGTTGCCCCAACTGTGGCGTGCCCACCACCACCAGCGATGGCGCCATGCCAACCGAACAACAACAACTACGTATTGAAAATGCTAAACTCAAAGCTGAGGTAGAGAAGCTGCGAGCTGCTTTAGGGAAATACGAGCCCGGGTCCACGTCCCCTTCCTGTTCTTCCGGCCATGATCAAGAGAATAGAAGCTCTTTGGATTTTTACACTGGAATATTTGGACTTGATAAGTCAAGGATAATGGATGTAGTAAATCACGCCATGGATGAGCTCGTTAAAATGGCTACCATGGGCGAACCATTATGGCTTCGTAGCTTCGAGACTGGTCGCCAAATACTTAACTATGATGAATATGTGAAGGAGTTTGCTGTTGAAAGTTCAAGCACTGGACAATCAAAGAGATCCATTGAAGCCTCACGAGACACTGGAGTTGTTTTTGTGGATCTCTCTCGGCTTGTCCAGAGTTTTCTGGATGTGAACCAATGGAAGGAAATGTTTCCCTGTTTGATATCTAAGGCGGCTACTGTTGATGTTATATGCAATGGAGAGGGTCCTAACAGGAATGGTACAGTGCAATTGATGTTTGCTGAGCTGCAAATGCTCACTCCTATGGTTCCTACAAGAGAAGTCTATTTTGTCCGTTTCTGCAAGCAGTTGAGTGCTGAACAGTGGGCAATCGTCGATGTTTCCATAGACAAAGTAGAAGACAACATTGACGCATCCCTCGTGAAATGCAGAAAACGCCCTTCTGGTTGCATTATTGAGGACAAGTCCAATGGCCATTGCAAAGTAATATGGGTGGAGCACTTGGAATGCCAGAAGAGTGCAGTCCATTCAATGTATCGCACCATTGTGAACAGCGGCCTAGCCTTTGGGGCAAGGCATTGGATTGCTACGCTACAACTTCAGTGCGAACGTCTAGTTTTCTTCATGGCAACAAATGTTCCCATGAAGGATTCAACCGGTGTTGCCACATTGGCCGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGAGTTTCTGCCATGCAATTGGGGCGTCTAGCTTCCACACATGGACCAAGGTTACAAGTAAAACTGGGGAAGACATAAGGATAAGTTCTAGAAAGAATTTGAACGATCCTGGTGAACCTATTGGTTTGATATTGTGCGCTGTTTGCTCTGTATGGCTGCCTGTCTCGCCTAATGTTCTGTTTGATTTCTTGAGGGATGAAATGCGCCGAACTGATTGGGATATCATGTCGAGTGGTGGGACAGTGCAGTCCATTGCAAATTTAGCCAAAGGACAAGACCGAGGCAATGCCGCAACCATTCAAACAATTAAATTGAAAGAAAACAGCGTGTGGATACTACAAGATAGCTGCACAAATCCTTACGAGTCAATGGTGGTATATGCTTCTGTGGACATTAATGGCATTCAGTCTGTGATGACAGGATGTGATTCAAGCAATCTTGCCATACTGCCCTCAGGATTCTCTATTATTCCTGATGGTCTTGAGTCAAGGCCACTGGTGATTTCTTCAAGGCAGGAAGAAAAAAATACTGAGGGAGGATCTTTGTTTACAATGGCATTTCAAATTCTCACCAATGCTTCTCCTACAGCTAAGTTAACAATGGAGTCTGTCGACTCTGTCAACACTCTTTTATCATGTACATTGAGAAATATCAGAACAAGTTTACAATGCGAAGATGGGTAGTCAATCACTTAAATAGAGTCATTGACTTTAATTGGCCGTGATAATCTTGGGCCCTCTATCCTTTTTGGATGATATTCGGTTTGGCAAAAATAGCTTGCGTTTGCCCCTTAATTCCGTTTTCTGGGTTAGTTTTATTCATTATTATTCCATTACGAAGAAGGGTCGGTTGAGTATGTATATTTGTCTCTGCAGTTTAGTAGGTAGAAAGAGAGATAAAAAGCTTTTAGAACCTAGATATTAAGTATCGCGTGTATAGATTTATCATTTGTTAATTCCTTATGCACTTGGTTTTTTGTAGTAATTTTGATTATCCCTACCTTACATGATTGATTTGATGGCCAAGATCGCGAATTATTGACTAAACAGTAGTGAACTAGTTATGAGAAGTTACTTCACACCCGAGTTCTGTT 2691 0.4381 MGADMSNNQPQTSHAKDLFASPALSLSLAGIFRHAGVAPMEVEDGDEAERLEEISSENSGPTRSRSDDDFEEPDYDDGLGDKNKPKKRKKYHRHTAQQIREMEALFKESPHPDEKQRQHLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKSEIDKLKDKNKTLRETINKACCPNCGVPTTTSDGAMPTEQQQLRIENAKLKAEVEKLRAALGKYEPGSTSPSCSSGHDQENRSSLDFYTGIFGLDKSRIMDVVNHAMDELVKMATMGEPLWLRSFETGRQILNYDEYVKEFAVESSSTGQSKRSIEASRDTGVVFVDLSRLVQSFLDVNQWKEMFPCLISKAATVDVICNGEGPNRNGTVQLMFAELQMLTPMVPTREVYFVRFCKQLSAEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKSAVHSMYRTIVNSGLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWSFCHAIGASSFHTWTKVTSKTGEDIRISSRKNLNDPGEPIGLILCAVCSVWLPVSPNVLFDFLRDEMRRTDWDIMSSGGTVQSIANLAKGQDRGNAATIQTIKLKENSVWILQDSCTNPYESMVVYASVDINGIQSVMTGCDSSNLAILPSGFSIIPDGLESRPLVISSRQEEKNTEGGSLFTMAFQILTNASPTAKLTMESVDSVNTLLSCTLRNIRTSLQCEDG 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03637 741 MobiDBLite consensus disorder prediction 40 95 - -
Pste3g03637 741 Gene3D - 77 157 - -
Pste3g03637 741 SMART HOX_1 87 149 IPR001356 GO:0003677
Pste3g03637 741 CDD homeodomain 92 143 IPR001356 GO:0003677
Pste3g03637 741 ProSiteProfiles 'Homeobox' domain profile. 85 145 IPR001356 GO:0003677
Pste3g03637 741 ProSiteProfiles START domain profile. 247 483 IPR002913 GO:0008289
Pste3g03637 741 SUPERFAMILY Bet v1-like 502 704 - -
Pste3g03637 741 SUPERFAMILY Bet v1-like 249 480 - -
Pste3g03637 741 Gene3D - 285 475 IPR023393 -
Pste3g03637 741 Coils Coil 144 171 - -
Pste3g03637 741 CDD START_ArGLABRA2_like 251 479 - -
Pste3g03637 741 FunFam Homeobox-leucine zipper protein GLABRA 2 256 479 - -
Pste3g03637 741 Pfam START domain 259 480 IPR002913 GO:0008289
Pste3g03637 741 Coils Coil 195 215 - -
Pste3g03637 741 SUPERFAMILY Homeodomain-like 75 146 IPR009057 -
Pste3g03637 741 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 86 736 IPR042160 -
Pste3g03637 741 SMART START_1 256 480 IPR002913 GO:0008289
Pste3g03637 741 MobiDBLite consensus disorder prediction 52 69 - -
Pste3g03637 741 ProSitePatterns 'Homeobox' domain signature. 120 143 IPR017970 GO:0000981|GO:0006355
Pste3g03637 741 FunFam Homeobox-leucine zipper protein HDG1 75 161 - -
Pste3g03637 741 Pfam Homeodomain 88 143 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03637 Pste-Chr3 28640646 28645892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03637 54 740 Homeobox Transcription Factor Family AT1G79840 65.670 0.0 930
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste3g03637 START 4.9e-56 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03637 3 28640646 28645892 Pste3g03637 3 28640646 28645892 ECH