Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03635 ATAACTTCAGTATTTCTCTCCCTCTCTTTCTCTAGCTTCTCACGTCTCCAAAACTTCTTCTCCCTCTTTTCCATCACGCAAACTCGTTTAGCAAGTAGCCTAAGCAGCTGAACTTCGAAGCCAAGGGAGCTACCCACGACTTAGCTTGCATTACCATGGGTAGATCACCTTGTTGTGACAAAAATGGTCTCAAGAAAGGACCATGGACACCAGAAGAAGACCAGAAACTTATTGATTATATTCAGAAACATGGGTATGGCAATTGGAGAATTCTCCCAAAGAATGCTGGGTTGCAAAGATGTGGAAAGAGTTGCCGTCTTCGTTGGACAAACTATCTCCGACCAGATATAAAGCGAGGTCGATTCACTTTTGAAGAGGAGGAGACTATAATACAACTACATAGCATTCTTGGCAACAAGTGGTCAGCAATTGCTTCTCGCTTGCCTGGGAGAACAGACAATGAAATCAAGAATTACTGGAATACCCACATTAGAAAAAGGCTTCTAAGGATGGGAATTGATCCTGTGACACATAGGCCAAGGCTTGACCTGTTAGACCTCTCCTCCATCCTTAGTTCATCCCTCTATGGTTCAACACAAATGAACATCCAAAGGCTTCTTGGTACACACACAGTGTTGAACCCTGAGCTTCTGAAGTTGGCTTCATCACTCTTTTCCTCTCAACAACGCGACCAACTCAACATGAGTGTACAAAATTGTGAAGAGAATCAGCTCTGCGGTTCTCAAATTCAGAACCAAATGCCACACATGGTACAAAGTCAGGACTTGGCTCAAGACGCATGTGAAACAACTTGCAGTACAATGAATCCCCCTTGTGCTTCATTATCATTGCCTTTCACTGAAGCACACTTGGTTGAATCCAATATGAATCCGTACCAATCAATTTTATATGACTCGGCCTTCGAACAACATTCTCACCTAAGTGATTTCCATGGCAATGGAATTGATCCAAGTTATGTTCCTCAATTACCAAACTATGATTACCACGGTTATGATTATTGTACAAATCTTGTAGACCCTCCAATGTCTGAATCCTCAACTTATAACCATTCCAATAACAGCAACCAGAACTTCAGCTTCGCTTCAGTTTTCTCAACGCCTTCGTCAAGCCCCACACCGTTGAATTCGAACTCAACGTATGTCAATGGGAGCAACAGCGTTACTGAGGATGAGACAGAAAGCTATGTCAGCAGCAACTTGTTGAGATTTGAACTCCCAGACATGTTAGGTAGGTGTGAATATATGAGTTCATGTAATTAATGTATTCACATCATGAAGCAATCGTTGAACAAAATCGAATTATGTAATGGTTGATTAATTCCTCGCACATTGATTTATCTGGGCTACCTATCTAGATAATTGCAATGGATAGAACGATTGTGTTGATAAGTG 1412 0.4164 MGRSPCCDKNGLKKGPWTPEEDQKLIDYIQKHGYGNWRILPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFTFEEEETIIQLHSILGNKWSAIASRLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHRPRLDLLDLSSILSSSLYGSTQMNIQRLLGTHTVLNPELLKLASSLFSSQQRDQLNMSVQNCEENQLCGSQIQNQMPHMVQSQDLAQDACETTCSTMNPPCASLSLPFTEAHLVESNMNPYQSILYDSAFEQHSHLSDFHGNGIDPSYVPQLPNYDYHGYDYCTNLVDPPMSESSTYNHSNNSNQNFSFASVFSTPSSSPTPLNSNSTYVNGSNSVTEDETESYVSSNLLRFELPDMLGRCEYMSSCN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03635 374 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Pste3g03635 374 CDD SANT 69 112 IPR001005 -
Pste3g03635 374 SMART sant 13 63 IPR001005 -
Pste3g03635 374 SMART sant 66 114 IPR001005 -
Pste3g03635 374 CDD SANT 16 61 IPR001005 -
Pste3g03635 374 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 279 - -
Pste3g03635 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pste3g03635 374 MobiDBLite consensus disorder prediction 325 351 - -
Pste3g03635 374 FunFam Transcription factor MYB39 69 130 - -
Pste3g03635 374 Gene3D - 13 66 - -
Pste3g03635 374 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste3g03635 374 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Pste3g03635 374 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste3g03635 374 FunFam MYB-related transcription factor 13 66 - -
Pste3g03635 374 Gene3D - 69 116 - -
Pste3g03635 374 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste3g03635 374 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03635 Pste-Chr3 28610250 28611923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03635 1 364 MYB Transcription Factor Family AT4G21440 53.457 5.32e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste3g03635 Myb_DNA-binding 7.9e-16 CL0123