Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03627 ATGACGTCACACTCCCACTACGCACCTGACCTAGACGTCGACTCCGTCACCTCCTCCCCTCGCTCCGACCACTTCCACGACGCCCCGCCCCGCGTCCGCTTTATGTGCAGCTTCGGCGGCAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGCTATGTCGGCGGCGACACCCGAATCGTCGCCGTCCACCGCTCCATCTCCTTCTCCGCCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGACCAACATAACTGCCAAGTACCAGCTCCCCAACGAGGATCTAGACGCGTTGATCTCGGTCACAACCGACGAGGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACAGAACCAAAACCCGCGATCGGCGCGCCTTCGCCTCTTCCTATTCCCCGACGGAGACGACTCTCGCGCCAGCAGCATCAACTCACTCCTAAACGGCTCAGCCAACCGCGAGAACTGGTTCCTCGACGCGTTAAACGGCGGCGTTTCGGCTCTCGAGCGAGGCCGCTCCGAAGCCTCTTCCATGGTCTCGGAAGTACCCGATTATCTCTTCGGGCTAGACAACTCCGAAGAATCACAACACCGCGAACCGCGACCCAAGGACCGACCCGCTCTACAAGACAGCGTTTCCCTTTCGGATCCCGGTTCGCCCGCCCCTGTTTCCTCTTCCCCGTTTTGTTCCACCTCATCATCACCCTGCGTGCCTTCTCTCCCCAACCTTCCCCCTGTTAAAACTAAACTCTCCAACCCGCTTCCTGATTCGGACCCCAAGGGAAATCACATCGAACCTGAACCAGAGGCTCAACCCAATATTAACCCAAATCCCAATCTCTACCCGGGTAACCCTGTAGTTCATTACCCTCCAGAAGCTGCTTATTCCTCTCATTCAGTAAACCCGGTTCCTCTTTTCTATGTTACCAGTCCGGTTCGACCTATGCAGACACCTTACCCATACGTTCAACAACCGTATCATGCAGTGGTGCAGCCTCAGGTCCCAATCGGGTACCACCCTATGGTTCCGGGATCAGGTCAAGTATATGGTGCAGGTGTCAGGCACATGGCTCCATTGCAACCTTACAGTCCTTCAGCCGCTGTTGTTCACGACTGCTTGAAACAACACATGTATCATGTCGTGCCTAACTCCGGTCCCGTTCCGGTTCAGCCGGTGATGGGTGCGGATGAATCCCAGAGAGGTGGAGCGGAGTTCGTTGCGGGTCGGGGCCCCAGCTCGATGAATAACTGA 1257 0.5712 MTSHSHYAPDLDVDSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSALILKLSKLSGMTNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPDGDDSRASSINSLLNGSANRENWFLDALNGGVSALERGRSEASSMVSEVPDYLFGLDNSEESQHREPRPKDRPALQDSVSLSDPGSPAPVSSSPFCSTSSSPCVPSLPNLPPVKTKLSNPLPDSDPKGNHIEPEPEAQPNINPNPNLYPGNPVVHYPPEAAYSSHSVNPVPLFYVTSPVRPMQTPYPYVQQPYHAVVQPQVPIGYHPMVPGSGQVYGAGVRHMAPLQPYSPSAAVVHDCLKQHMYHVVPNSGPVPVQPVMGADESQRGGAEFVAGRGPSSMNN 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03627 418 MobiDBLite consensus disorder prediction 397 418 - -
Pste3g03627 418 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Pste3g03627 418 SUPERFAMILY CAD & PB1 domains 47 143 - -
Pste3g03627 418 SMART PB1_new 46 136 IPR000270 GO:0005515
Pste3g03627 418 MobiDBLite consensus disorder prediction 214 239 - -
Pste3g03627 418 CDD PB1_UP2 35 134 - -
Pste3g03627 418 PANTHER OS05G0427100 PROTEIN-RELATED 14 351 - -
Pste3g03627 418 MobiDBLite consensus disorder prediction 1 25 - -
Pste3g03627 418 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Pste3g03627 418 Gene3D - 52 135 - -
Pste3g03627 418 MobiDBLite consensus disorder prediction 195 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03627 Pste-Chr3 28541671 28543003 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03627 26 156 MAP Kinase Kinase Kinase AT5G57610 45.946 8.85e-31 123