Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03618 CAGATAACAACAGCACCAGGGCGGCGTTGAACACTCTTCTCTTTCGTCTTTAATGTTTATTCTCTACTCATCACTTTTCACCCTTTATTGTTATCTCCAATCCATTACACGTCTCTGTATTCTCAACAACATGGCCATCACCAACTCACTCAAACATGCAGTTTTTCAGCTACTTTTATTCTTTTTCTTCTCTTTTCATGCTTTGTTCTCTCATGCAGCCTATTCCATCATAGGGAAGACGACAGTAATCAGAGATGACCTTGGTGGTGGCAACTTGGTGTCAGAAGATCTCACCTTTGAAATGGGCTTCTTTGGTTTTGATAACTCTTCAAGATACGTTGGGATTTGGTACCACAACGTTCCTGCTTCTGCTGCAGCATATATATGGGTTGCAAATAGAGAGAGACCCATCAGGGATAGAAGAGGTTCCATCAAAATAAAAGATGATGGCAATTTGGTTGTCCTCGATGGAGACAACAACGAGGTGTGGTCAAGTAAGGTGACAATTAATGCAAAGAACAACACAAAAGCTGTTCTTCGTAATGATGGAAACCTTGTTCTTTCAGAAGAAGACAAAGATGTGTGGCATAGCTTTGAGCACCCAATTGATACGTTTGTGCCAGGTATGATGCTGCCAGCTAGAACTGGAATGGGAATGTTCAAGTCATGGAAATCAGCAACGGATCCTTCACCGGGAAACTACTCAATGGGGGCTGATTCTGGCGGAACAATACAGATTTTGATTTTGGATGGGGATAAAAGGAGGTGGAGAAGTGGGTATTGGGATGGTAGAGTATTCACTGGTGTGTCCAATATGACAGGAACCTCTCTCTTTGGTTTCAAACTCAATCAAGGTAATGATAAAGTAGGTGAATACTTTACATATATGTGGAATAGCCCTGGCGAGCACGTGAGGTTTCAGATAACTTGGGATGGGTTTGAAAAGCGGTTCCAGTGGGATAAGGATGACAAAAAATGGATTGAGACGCAACATGAGCCTTATAATAAGTGTGAACAATATAATACTTGTGGTAGTTTTGCAGTGTGCGATATAGCTAGCCATCCTTTTTGTAGTTGCATGCAAGGGTTTGAACCAAAGCATTGGGAAGAGTGGAATAGTGGGAATTGGTCTAGGGGGTGTGCCAGGAGGACTCCACTGAAGGCTGAGAGAGCTAATAATAGTTCTGGAACTGAGGCTAGCGTTGGAGAAGATGATTTCTTGGAGCAAAAGTGTACAAAGTTACCGGATTTTGCACGTTTGGAGAGTCCTGATGACGATGGGGATTGTAAGAGCTATTGTCTCAAGAATATTTCTTGTACTGCATATTCATTTACTATTGGAATTGGGTGCATGATTTGGTACGGGGAGTTACTTGACATTCAGCACACTCAAAATAATCTTGGAAATGTACTGCACATCCGTCTAGCTGATGCTGAATTAGACCATAGGGAGAAAAAGACCAAAATTGGGATAATAATAGTAGCTGTTGTGGGGGGGCTGATCTGCCTTGGAATAGTTGTATTGCTAGTATGGAGGTTTAAGAGAAAACGTAAAGTTTCCTCAGCTCTAGGTTACAACAACAGTAGCGATCCTCAATTGTTTGATTTAACGAGGAGTACAGACTTATCGACAGAATTTTCAGGATCAACAGAGTTAGGCTTAGAAGGAAACCGACTAAATGGAGCAGAACTTCCATGGTTCAATTTTAGCTGCATTGTAGCAGTAACAAACAATTTCTCAGAAGAAAATAAACTTGGACAAGGGGGATTTGGTCCTGTCTACAAGGGAAAGCTTCCAGGAGGAGAGGAAGTAGCGGTCAAGAGGCTTTCAAAAAAGTCTAGCCAAGGTTTAGAGGAGTTCAAAAATGAAATGATGCTAATAACCAAACTACAACATAGAAATCTGGTTAAACTATTGGGATGCTCCATTCAAGGGGAAGAAAAGATATTGGTATATGAGTACTTGCCAAACAAAAGCTTGGACCACTTTTTATTTGATCCAGTGAAGCAAACACAACTAGACTGGACAAAACGCTTTGAAATAATTGAGGGCATTGCAAGAGGGCTACTTTACCTGCACCGGGATTCAAGACTAAGAATAATTCACCGCGATCTAAAAGCAAGTAACATTTTGTTGGATGAAAACATGAATCCAAAAATTTCAGATTTTGGTTTGGCTAGAATATTTGGAGGAAATCAAAACGAAGCCAACACAAATAGAGTGGTTGGTACATATGGTTATATGTCTCCTGAATATGCAATGGAAGGTCTATTTTCAGTTAAATCAGATGTTTATAGTTTTGGTGTGTTGTTACTTGAGATTATGAGTGGCCGCAAGAACACAAGCTTTCGTGACACAGAAGAATCAAGTCTCATAGGATATGCCTGGCACCTTTGGAGTGAGCAGAGAGTAATGGAGCTTGTTGATCCTTCCATTCAAGATTCAACTCCAAAGAGTGAAGCGTTGAGATTCATACACATAGGGATGTTATGCGTGCAAGATTCAGCATCTCGTAGACCAAATATGTCCTCTGTGTTGCTGATGCTTGGAAGTGAATCCACAGCTCTTCCTTTACCTAAGCAACCTTTGCTGCTTACTTCTTCCATGAGGAAATATGATGATAGAGAATCTTATAGTGAAGGCCTTGATGTGTCAAATGATTTGACAGTTTCAATGGTCACAGGGAGATAGAAATATTACATTACATTTTATTACTTTCTGTTCGGTTTTGCTTAGACTCTTTTCAACCTACAAAACTGTACACATTTTCTTTTTTATATCCCACCCTTAATATTGAGTCCATTGTATATATAATTTATAAACCAAAATATCTTTTGAGACTCCAAAAGAGTGCCTTGATTCCTGGTCAATAAGAGGAGTCTTCTAGGCTGATCGTAAAAGAAGCTGGTGGATCTATGTACTGTGTAGCATTTTTATTTGTTTTTTTTGAGACATGGTTGTATATTATTGACAATTATTATATTCTTGAAGGAGC 2996 0.3985 MFILYSSLFTLYCYLQSITRLCILNNMAITNSLKHAVFQLLLFFFFSFHALFSHAAYSIIGKTTVIRDDLGGGNLVSEDLTFEMGFFGFDNSSRYVGIWYHNVPASAAAYIWVANRERPIRDRRGSIKIKDDGNLVVLDGDNNEVWSSKVTINAKNNTKAVLRNDGNLVLSEEDKDVWHSFEHPIDTFVPGMMLPARTGMGMFKSWKSATDPSPGNYSMGADSGGTIQILILDGDKRRWRSGYWDGRVFTGVSNMTGTSLFGFKLNQGNDKVGEYFTYMWNSPGEHVRFQITWDGFEKRFQWDKDDKKWIETQHEPYNKCEQYNTCGSFAVCDIASHPFCSCMQGFEPKHWEEWNSGNWSRGCARRTPLKAERANNSSGTEASVGEDDFLEQKCTKLPDFARLESPDDDGDCKSYCLKNISCTAYSFTIGIGCMIWYGELLDIQHTQNNLGNVLHIRLADAELDHREKKTKIGIIIVAVVGGLICLGIVVLLVWRFKRKRKVSSALGYNNSSDPQLFDLTRSTDLSTEFSGSTELGLEGNRLNGAELPWFNFSCIVAVTNNFSEENKLGQGGFGPVYKGKLPGGEEVAVKRLSKKSSQGLEEFKNEMMLITKLQHRNLVKLLGCSIQGEEKILVYEYLPNKSLDHFLFDPVKQTQLDWTKRFEIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIMSGRKNTSFRDTEESSLIGYAWHLWSEQRVMELVDPSIQDSTPKSEALRFIHIGMLCVQDSASRRPNMSSVLLMLGSESTALPLPKQPLLLTSSMRKYDDRESYSEGLDVSNDLTVSMVTGR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03618 879 Gene3D - 462 505 - -
Pste3g03618 879 CDD B_lectin 69 184 IPR001480 -
Pste3g03618 879 ProSiteProfiles PAN/Apple domain profile. 384 459 IPR003609 -
Pste3g03618 879 Gene3D Transferase(Phosphotransferase) domain 1 638 839 - -
Pste3g03618 879 SMART blect_4 67 184 IPR001480 -
Pste3g03618 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 512 637 - -
Pste3g03618 879 CDD STKc_IRAK 568 832 - -
Pste3g03618 879 Pfam D-mannose binding lectin 110 201 IPR001480 -
Pste3g03618 879 Pfam Protein tyrosine and serine/threonine kinase 565 829 IPR001245 GO:0004672|GO:0006468
Pste3g03618 879 SMART ntp_6 384 458 IPR003609 -
Pste3g03618 879 ProSiteProfiles Protein kinase domain profile. 562 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03618 879 SUPERFAMILY alpha-D-mannose-specific plant lectins 110 212 IPR036426 -
Pste3g03618 879 Gene3D - 67 181 IPR036426 -
Pste3g03618 879 CDD PAN_AP_plant 386 459 - -
Pste3g03618 879 Gene3D Phosphorylase Kinase; domain 1 534 637 - -
Pste3g03618 879 CDD TM_EGFR-like 471 501 - -
Pste3g03618 879 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 142 847 - -
Pste3g03618 879 SMART serkin_6 562 832 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03618 879 ProSiteProfiles Bulb-type lectin domain profile. 61 183 IPR001480 -
Pste3g03618 879 Pfam S-locus glycoprotein domain 239 349 IPR000858 GO:0048544
Pste3g03618 879 PIRSF SRK 29 879 IPR024171 GO:0004674
Pste3g03618 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 638 840 - -
Pste3g03618 879 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 52 181 - -
Pste3g03618 879 Pfam PAN-like domain 385 443 IPR003609 -
Pste3g03618 879 SUPERFAMILY Protein kinase-like (PK-like) 547 853 IPR011009 -
Pste3g03618 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03618 Pste-Chr3 28479362 28483506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03618 474 845 Receptor kinase-like Gene Family AT4G23230 54.692 2.71e-132 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g03618 PK_Tyr_Ser-Thr 1.2e-50 CL0016