Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03612 TCCCCATATGCTTGTAACTCTTACTTTGCCTCTCCAAACATGAGAGGCACTTTCTTCCTTTTTTGTTTCACCACTCTCTTCCCCACGCTTTCAGTCTCTATTGACACCTTAACATCCTCGCAATCCCTCCCAACCAACCAAACGCTCCTTTCCCTAAATGCTATTTTCGAGTTGGGTTTCTTTTCTTACTCCAATTCCTTGTATTTGGGCATATGGTACAAAACTAGCATCAAAGACAATGATCCAACAGTGGTGTGGGTGGCAAACAGAGACACCCCACTTCAAAACTCCATCGGATTTCTCAAAATAGGCGACAAGGGAAACCTTGTCATCATCAACCAATCCCAGAAACCCATTTGGTCCTCTAATGAAACCAACGGCAGCAACCCAATTCTTCAGCTTTTGGATTCCGGAAACCTGGTTCTGAAAGAAGCAAACGAGAATGACCCAACCAAATTTCTCTGGCAGAGCTTCGATTACCCGACAGACACCTTGTTACCCGGCATGAAACTGGGTTGGGACTTGGACACAGGAATGGAAAAACACATAACCTCGTGGAGGTTGACAAACCAAGATCCTTCAAGCGGGGATTTTTCCTTCAAGCTCGATTACCGTGGCCTCCCAGAAATATTCCTCTACAACAAGGACCAGATAATCTACCGTAGTGGCCCCTGGAACGGCGAGAGATTCAGCGGGGTACCCGAGATGCAACCCGTCACAGATTCCATCAAGTTCACGTTTTTCGCCGACCAACACCAAGTATACTACACATTCTCAATTGGGAACAGCTCCTTACTCTCTCGACTCTCTGTTAGTTCAAATGGGGAGCTCCAACGCCTCACGTGGATCCAAAGCACGCAGATTTGGAACAAATTCTGGTACGCTCCCAAGGACCAATGCGACAGCTACCGAGAGTGCGGGCCCTACGGGGTCTGTGACGCCAACGCCTCACCGGTCTGTAACTGTATCAGCGGGTTCCACCCCAAGAACCAGCAAGCTTGGAACTTGCGAGATGGGTCCGATGGCTGCGTGAGGAACACCAAATTGGCCTGTGAGAGTGACGGGTTTTTGCATATGATGAACTTGAAGCTGCCAGAGACAACGTCGGTGTTCGTGAACAGGAGCATGGGGTTAGTCGAGTGTCGGGATTTGTGCATCAGGAATTGTTCCTGCACTGCTTATGCCAATATTGAGATTACTAACGGGGGAAGTGGCTGTGTCATGTGGTTTGGGGAGCTTTTGGATGTGAGAAGATACCCTTCTGGGGGCCAAGATTTTTATGTCAGATTGGCAGCTTCTGATCTCGATGACATAGGGGTTGAAGGTGGTTCTCACAAGACAAGTAATACAGTTAAGGATGTAGGCATTATAGTTGGTGTTGCAGCTTTTATACTATTGGCATTTGGCATCTTCATCTTATGGAAAAAGAGGAAATTGCAATGTTTATTGAAAGGGAAGACAGAAAAAAGAGGTTTCCCAGAAAGAAGTCAGGATTTGTTAATGAATGAGAGAGTGTTTTCAAGTAACAGAGAACAGTCTGATGAAAGTAACTTGAACGACCTAGAGTTGCCATTGTTTGATTTTAACACCATAACAATGGCTACAAACAATTTCTCTGAAGAAAATAAACTTGGACAAGGAGGCTTTGGTATTGTTTACAAAGGCAGGTTGATGGAAGGTCAGAACATTGCTGTGAAGAGATTATCAAAAAATTCTGGGCAAGGTGTAGAGGAGTTTAAGACTGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTTGTTCGGCTGCTTGGCTGCAGCATTCAGATGGATGAGAAGATGCTAGTGTATGAGTACATGGAAAATCGAAGCCTCGATGCCATTTTGTTTGATAAAGCAAAAAAATCGTCACTCGTCTGGCAAAGGCGCTTCAACATTATATGTGGCATAGCTAGAGGGCTTCTTTATTTGCACCAAGATTCCAGATTTAGGATCATCCACAGGGATCTTAAGGCAAGCAACATTCTACTTGACAGAGACATGAACCCAAAGATTTCTGACTTTGGGATGGCAAGAATTTTTGGCACGGATCAAACAGAAGCTAATACCATGAGAGTTGTTGGAACATATGGCTACATGTCCCCTGAATATGCTATGGATGGGATCTTCTCAGTAAAATCTGATGTTTTTAGTTTTGGGGTTCTTGTGTTGGAGATAATAAGTGGAAAAAAGAATAGAGGATTCTATTATGCAAACAAGGAATTGAATCTACTTGGGCATGCGTGGAAGCTGTGGACAGAAGGAAATGCGTTGGAACTAATTGATTCGTCTATTGACAATTCATATTCACCATCTGAAGTTCATAGATGCGTACAAATTGGGCTCTTATGCGTGCAAGAGCGTGCAGAAGATAGGCCTACAATGTCCTCAGTGGTCTTGATGCTAAGTAGTGACACTGCATCAATGTCACAACCCAAAAACCCTGGATTTTGTCTAGGAAGGAATCCAATGGAAACTGATTCTTCTTCAGGTAAACAAGAAGAATCATGTACTGTGAACCAAGTCACTGTCACAATGCTAGATGCCAGGTAATGAAACAAATATGACCTCATATATATAGTTGTAGCACATCAATATATTCACAAAATTCTTTTAAGTGTTAATCCTTCATCTTATAGTTACCATGTTTTTTTATATATAGTATAATTTTTTTTTCGGTGTAATATAGTAGAGATGTCTCGGTTAAATTGTTCTATAAATTTTAAGATACTTTTTTTTTTTTTTAAAGTTTAAGATACTTTGTTGCTGA 2791 0.4249 MRGTFFLFCFTTLFPTLSVSIDTLTSSQSLPTNQTLLSLNAIFELGFFSYSNSLYLGIWYKTSIKDNDPTVVWVANRDTPLQNSIGFLKIGDKGNLVIINQSQKPIWSSNETNGSNPILQLLDSGNLVLKEANENDPTKFLWQSFDYPTDTLLPGMKLGWDLDTGMEKHITSWRLTNQDPSSGDFSFKLDYRGLPEIFLYNKDQIIYRSGPWNGERFSGVPEMQPVTDSIKFTFFADQHQVYYTFSIGNSSLLSRLSVSSNGELQRLTWIQSTQIWNKFWYAPKDQCDSYRECGPYGVCDANASPVCNCISGFHPKNQQAWNLRDGSDGCVRNTKLACESDGFLHMMNLKLPETTSVFVNRSMGLVECRDLCIRNCSCTAYANIEITNGGSGCVMWFGELLDVRRYPSGGQDFYVRLAASDLDDIGVEGGSHKTSNTVKDVGIIVGVAAFILLAFGIFILWKKRKLQCLLKGKTEKRGFPERSQDLLMNERVFSSNREQSDESNLNDLELPLFDFNTITMATNNFSEENKLGQGGFGIVYKGRLMEGQNIAVKRLSKNSGQGVEEFKTEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKAKKSSLVWQRRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDRDMNPKISDFGMARIFGTDQTEANTMRVVGTYGYMSPEYAMDGIFSVKSDVFSFGVLVLEIISGKKNRGFYYANKELNLLGHAWKLWTEGNALELIDSSIDNSYSPSEVHRCVQIGLLCVQERAEDRPTMSSVVLMLSSDTASMSQPKNPGFCLGRNPMETDSSSGKQEESCTVNQVTVTMLDAR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03612 844 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Pste3g03612 844 CDD STKc_IRAK 531 796 - -
Pste3g03612 844 ProSiteProfiles Protein kinase domain profile. 525 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03612 844 SMART serkin_6 525 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03612 844 Pfam Protein tyrosine and serine/threonine kinase 528 794 IPR001245 GO:0004672|GO:0006468
Pste3g03612 844 SUPERFAMILY Protein kinase-like (PK-like) 505 796 IPR011009 -
Pste3g03612 844 CDD PAN_AP_plant 334 418 - -
Pste3g03612 844 Pfam D-mannose binding lectin 70 174 IPR001480 -
Pste3g03612 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Pste3g03612 844 Pfam Domain of unknown function (DUF3403) 798 844 IPR021820 GO:0004674
Pste3g03612 844 Pfam Receptor serine/threonine kinase 481 515 IPR022126 GO:0004674
Pste3g03612 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 145 - -
Pste3g03612 844 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 214 IPR036426 -
Pste3g03612 844 Gene3D - 17 145 IPR036426 -
Pste3g03612 844 PIRSF SRK 1 844 IPR024171 GO:0004674
Pste3g03612 844 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Pste3g03612 844 CDD B_lectin 27 148 IPR001480 -
Pste3g03612 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 804 - -
Pste3g03612 844 Gene3D Phosphorylase Kinase; domain 1 498 600 - -
Pste3g03612 844 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Pste3g03612 844 Gene3D Transferase(Phosphotransferase) domain 1 601 809 - -
Pste3g03612 844 SMART blect_4 27 148 IPR001480 -
Pste3g03612 844 Pfam PAN-like domain 338 403 IPR003609 -
Pste3g03612 844 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 490 600 - -
Pste3g03612 844 SMART ntp_6 338 417 IPR003609 -
Pste3g03612 844 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
Pste3g03612 844 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03612 Pste-Chr3 28443993 28451229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03612 513 844 Receptor kinase-like Gene Family AT4G11530 58.457 1.64e-132 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g03612 PK_Tyr_Ser-Thr 9.1e-49 CL0016