Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03610 TTCTCGTTTTGCTCTTGTTCTGATACAATATCTGCTCTCAAAGCCATCAGAGATGGTGAGACTCTTGTTTCCAAAGCCAAAACATTTGCTCTTGGATTCTTCAGTCCAGGCAAGTCCAATTCCCGCTATGTTGGAATATGGTTCAACAACGTTAAACAACAAACTGTTGCTTGGGTTGCAAATAGAGACACTCCCATCAACGACACTTCTGGGGTTCTCTCAATCGACCCACGTGGAAACCTAGTCCTCCACCATAACTATAGCACTAGTGCCATTTGGTCTACCGATGTTTTAGCCACACAATCAAATAGTAGCAACGTCATAGCTCAACTCTCAGACCTAGGAAACCTTGTTCTTATTCTTAACAACTCCAAAACTGTCATCTGGCAAAGCTTTGACCATCCCACAGACACTTTGATTCCATATTTAAGAATTGGTTTTGACAGAAGGGCTAACCAGAGTTGGATTCTCCAATCTTGGAAAACAGATGATGACCCGGGAAAAGGTTCTTACACATTGGAATTCACCACTGTTGGGAAACCACAGTTGTTCTTTTACCACGAGAACCTTCCCTTGTGGCGAGGTGGATCGTGGAACGGTGACTTGTTTATGGGCGTACCCAACATGAAAAGAGATTTGTTTACTTTTAACGTTTCTTTTGTGGAAGATGACTACCATGTAGCACTCTCGTTTAACCCGCTTAATAAGTCCCTGATCACTTGGGTAGTAGTTCAACAATCAGGTTTCTTTAACGTGTTCACTTGGGATAACCAAAAGAATCAGTGGAACCGGTACTGGTCTGTGCCTATAAACCAATGTGATAACTATGGAACCTGTGGATCAAATGGTAACTGTGACTCTTTGAACTTTGAGGGCTTTCGGTGTACTTGTTTGCCTGGGTTTGAACCTAAATTCCCACATGATTGGTATGAGAACAGAGATGGGTCAGGAGGGTGTGTGAGGAAGCAAGGTGTATCCATTTGCAGGAATGGAGAAGGCTTTGTCAAACTTGAAGGATTGAAGGTTCCTGATACCTCTGTGGCAATTGCCACAGAGGGTTTAAGTTCGGTAGAGTGTGAGCAGGAATGCTTGAGAAACTGCTCTTGCACAGCATATGCAGTTCTTGATGTGAGGAATGGCGGAAGTGGGTGTTTAGCATGGCATGGGAATTTAATGGACACGCAAAAGCTAAGTGATCAAGGACAAGATTTATTTGTGCGTGTTGACGCAGTTGAACTAGCAAATTTTAATAAAAAGACAAATGGAGTACTTGGTACCAATAGAATGGTCGCAATTATAATTGCTTCTGTACTAGCAACTGTCATTCTCATCTTCGGTGTGTATTACTTGTGGAAGAGAAAATGCAAAGAAGGTAGCGATGTTCAAAGCAACACACATCCAAATCTTCCGTTTTTCAGCCTTAAAATGATCATGACAGCCACAAGTAATTTTGGTCACGAAAGTAAGCTTGGACAAGATAAAAATCAAAGATCGTCGTTGACTTGGGATAAGCGCTTTGAAATCATTTTGGGAATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCCAGGCTCAAAATAATTCACAGAGATCTAAAAGCCAGTAATATTCTTCTTGATGCTGCAATGAATCCAAAAATCTCAGATTTTGGTATGGCTAGAATGTTTGGTGAAGATCAAATTCAGGCAAGAACAAAAAGAGTGGTTGGAACATATGGTTATATGTCACCTGAATATGCGATGCAAGGACGATATTCAACAAAATCCGATGTGTTTAGCTTTGGGGTCATACTACTGGAGATTATTGCTGGCAAGAGGAACACAGATTGTTGCCTAGAAAGTGCCTCCCCAAATTTGATTGGATACGTGTGGATACTTTGGACAGAAAGAAAGGCCTTGGATATAGTTGATTCAACACTATGTCAATCTTATCCCCATGATCTTGTTCTGAGGTGCATTCAAATTGGACTATTGTGTGTTCAAGAAAATGCTATCGATAGACCATCCATGTTGAAAGTTGTTTTCATGCTAGGCAATGAAACACCTCTTTCCCCACCTAAAAAGCCAGCATTTTTATTAAATGGGAGCCAAGATTTGCCTGAGCCATCAACATCAGGAGGAGGATCTTCAATAAATGAAATTTGCCTGATAAGCCCTTGGATAATACTCTTCAGCTTCTCGTTTTGCTCTTGTTCCGATACCATATCTGCTCTCAAAGCCATCAAAGATGGCGAGGTTCTTGTTTCCAAAGCCAAAACATTTGCTCTTGGATTCTTCAGTCCAGGCAAGTCCAACTCCCGCTATGTTGGAATATGGTACAACAATGTTCAACAACAAACAGTTGCTTGGGTTGCAAACAGAAACGCTCCCATCAATGACTCATCTGGGGTACTCTCAATCAACCCAGATGGAAATCTAGTCCTCCATCACAAATATAGCACCATTCCTATTTGGTCTAGCAATGTTTCAGCCACCCAATCAAACAGCACCAACAACATCATAGCTCAACTCTCAGACGTAGGAAACCTTGTTCTGATTCTAAACAACACCAAAACTGTCATCTGGCAAAGCTTTGAGCATCCCACTGATACCTTGCTTCCAGATCTAAGAATTGGTTTTGACAGAAGAACTAACCAAAGTTGGTTCCTCCAATCATGGAAAACAGATGATGACCCGGGAACAGGTTCTTACACCTTGAAAATAAGCACCAGTGGGAAACCACAGTTGTTCTTTTACCACCAGCACCTTCCCTTGTGGCGAGGCGGATCGTGGAACGGTGAATTACTTATTGGTATACCTGACATGAAAATAGATATGTTCACTTTTAATGTTTCTTTTATAGAAGATGACAACTACGTAGCACTTTCATGTGAACCGGTTAATAAATCCTTGATCTCAAGGATAGTAGTCCAACAATCAGGTTTCTTTCAAGTATTCACTTGGGATAACCAAAAGAACCAATGGAACAGGTACTGGTCTGAACCAACAAATCAATGTGATAACTATGGAACCTGTGGATCAAATGGTAATTGTGACCCTTTGAACTTTCAGAAGTTTCGTTGTACTTGTCTACCTGGGTTTGAGCCCAAATTCCCACATGATTGGTATGAGAGCAGAGATGGGTCGGGAGGGTGCGTGAGGAAGCAAGGTGCAGCAGTTTGTGGGAAGGGAGAAGGTTTTGTCAAACTTGAAAGCCTGAAGCTTCCTGATACCTCTCTGGCAATTGCCAAACAAGGTTTTAGTTTGGAAGAGTGTGAGCAGGAATGCTTGAGAAACTGCTCTTGCACTGCATATGCAGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGTTTGGCATGGCATGGGAATTTAATAGACATACAAAAACTAAGTGATCAAGGCCAAGATTTATTTGTTCGTGTTGATGCAGTTGAACTAGCAAATTATAACAAAAGACCAAAAGGAGTACTTGGTAGAAAGAGGATTGTGGCAATTCTGTTTGCTTCTGTGATAGCAAGTGTCATTCTTTTCTCCTATGTGTATTACCTGTGGAAGAGAAAGAGCAAAGATAAAGTGATGCAGCATATAAGCCAAGATTACCCTCGAGAAGAGAACGATGTTCAGAGCAACACACATCCAAATCTTCCTTTTTTCAGCCTTAAAACGATCATCGCAGCAACAAAAAATTTTGGTCATGAGAATAAGCTTGGGCAAGGTGGATTTGGTTCTGTCTATAAGATGTTTCAGGGTTGCCTAGCCAACGGACAAGAGATAGCAGTGAAAAGATTGTCTGAACATTCAGGTCAAGGAACAGAAGAGTTTAAAAATGAAGTTTCATTATTAGTTAAACTCCAACACAGAAATCTGGTGAGGTTACTTGGCTGCTGCTTTGAAAAAGAAGAAAGGATGCTAGTCTATGAATACCTTCCAAATAAAAGCTTGGACTTTTTTATATTCGATAAAAACCAAAGATCATCACTGGCTTGGGATAAGCGCTTTGAAATCATTTTGGGGATTGCTCGAGGTGTTTTATATCTTCATCAAGATTCAAGGCTGAAAATAATTCACAGAGATCTAAAAGCCAGCAATGTTCTACTTGATGCTGCAATGAATCCCAAAATCTCTGATTTTGGTATGGCTAGAATATTTGGAGAAGATCAAATCCAGGCAAGGACCAAAAGAGTGGTTGGAACATATGGTTATATGTCACCGGAATATGCAATGGAGGGAAGATATTCAACAAAATCTGACGTGTTTAGCTTTGGGGTCTTACTATTGGAGATTATTGCAGGCAAGAGGAACACAGATTGTTGCAAAGAGAGAGCCTCCCCAAATTTAATTGGATACGTGTGGATACTTTGGACAGAAGGAAGTGCCTTGGATATGGTTGATTCAGCATTATGTGAATCTTATCCCCATGCCCTTGTTCTGAGGTGCATTCACATTGGACTATTGTGTGTGCAGGAAAATGCTATCAATAGACCATCCATGTTAGAAGTTGTTTTCATGCTAAGCAATGAAACACATCTTTCCCCACCCAAAAAGCCTGCATTTTTATTAAACGGGAACCAAGATTTTCCTGAGTCATCAACATCAGGGGGAGGTTCCTCAATAAATGAAGTAACAGAAACTACCATCAGTGCTCGC 4626 0.4094 FSFCSCSDTISALKAIRDGETLVSKAKTFALGFFSPGKSNSRYVGIWFNNVKQQTVAWVANRDTPINDTSGVLSIDPRGNLVLHHNYSTSAIWSTDVLATQSNSSNVIAQLSDLGNLVLILNNSKTVIWQSFDHPTDTLIPYLRIGFDRRANQSWILQSWKTDDDPGKGSYTLEFTTVGKPQLFFYHENLPLWRGGSWNGDLFMGVPNMKRDLFTFNVSFVEDDYHVALSFNPLNKSLITWVVVQQSGFFNVFTWDNQKNQWNRYWSVPINQCDNYGTCGSNGNCDSLNFEGFRCTCLPGFEPKFPHDWYENRDGSGGCVRKQGVSICRNGEGFVKLEGLKVPDTSVAIATEGLSSVECEQECLRNCSCTAYAVLDVRNGGSGCLAWHGNLMDTQKLSDQGQDLFVRVDAVELANFNKKTNGVLGTNRMVAIIIASVLATVILIFGVYYLWKRKCKEGSDVQSNTHPNLPFFSLKMIMTATSNFGHESKLGQDKNQRSSLTWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNILLDAAMNPKISDFGMARMFGEDQIQARTKRVVGTYGYMSPEYAMQGRYSTKSDVFSFGVILLEIIAGKRNTDCCLESASPNLIGYVWILWTERKALDIVDSTLCQSYPHDLVLRCIQIGLLCVQENAIDRPSMLKVVFMLGNETPLSPPKKPAFLLNGSQDLPEPSTSGGGSSINEICLISPWIILFSFSFCSCSDTISALKAIKDGEVLVSKAKTFALGFFSPGKSNSRYVGIWYNNVQQQTVAWVANRNAPINDSSGVLSINPDGNLVLHHKYSTIPIWSSNVSATQSNSTNNIIAQLSDVGNLVLILNNTKTVIWQSFEHPTDTLLPDLRIGFDRRTNQSWFLQSWKTDDDPGTGSYTLKISTSGKPQLFFYHQHLPLWRGGSWNGELLIGIPDMKIDMFTFNVSFIEDDNYVALSCEPVNKSLISRIVVQQSGFFQVFTWDNQKNQWNRYWSEPTNQCDNYGTCGSNGNCDPLNFQKFRCTCLPGFEPKFPHDWYESRDGSGGCVRKQGAAVCGKGEGFVKLESLKLPDTSLAIAKQGFSLEECEQECLRNCSCTAYAVLDVRNGGSGCLAWHGNLIDIQKLSDQGQDLFVRVDAVELANYNKRPKGVLGRKRIVAILFASVIASVILFSYVYYLWKRKSKDKVMQHISQDYPREENDVQSNTHPNLPFFSLKTIIAATKNFGHENKLGQGGFGSVYKMFQGCLANGQEIAVKRLSEHSGQGTEEFKNEVSLLVKLQHRNLVRLLGCCFEKEERMLVYEYLPNKSLDFFIFDKNQRSSLAWDKRFEIILGIARGVLYLHQDSRLKIIHRDLKASNVLLDAAMNPKISDFGMARIFGEDQIQARTKRVVGTYGYMSPEYAMEGRYSTKSDVFSFGVLLLEIIAGKRNTDCCKERASPNLIGYVWILWTEGSALDMVDSALCESYPHALVLRCIHIGLLCVQENAINRPSMLEVVFMLSNETHLSPPKKPAFLLNGNQDFPESSTSGGGSSINEVTETTISAR 1542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03610 1542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1347 1359 IPR008271 GO:0004672|GO:0006468
Pste3g03610 1542 CDD PAN_AP_plant 329 408 - -
Pste3g03610 1542 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1187 1301 - -
Pste3g03610 1542 FunFam Os04g0303100 protein 45 190 - -
Pste3g03610 1542 Pfam Protein tyrosine and serine/threonine kinase 1226 1493 IPR001245 GO:0004672|GO:0006468
Pste3g03610 1542 Pfam Protein tyrosine and serine/threonine kinase 494 674 IPR001245 GO:0004672|GO:0006468
Pste3g03610 1542 SUPERFAMILY Protein kinase-like (PK-like) 1204 1504 IPR011009 -
Pste3g03610 1542 Gene3D - 3 133 IPR036426 -
Pste3g03610 1542 Gene3D - 728 859 IPR036426 -
Pste3g03610 1542 ProSiteProfiles PAN/Apple domain profile. 328 409 IPR003609 -
Pste3g03610 1542 CDD B_lectin 741 861 IPR001480 -
Pste3g03610 1542 SUPERFAMILY Protein kinase-like (PK-like) 495 691 IPR011009 -
Pste3g03610 1542 ProSitePatterns Protein kinases ATP-binding region signature. 1229 1254 IPR017441 GO:0005524
Pste3g03610 1542 SMART ntp_6 329 408 IPR003609 -
Pste3g03610 1542 SMART ntp_6 1055 1134 IPR003609 -
Pste3g03610 1542 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 685 - -
Pste3g03610 1542 SUPERFAMILY alpha-D-mannose-specific plant lectins 781 892 IPR036426 -
Pste3g03610 1542 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 718 1489 - -
Pste3g03610 1542 Pfam PAN-like domain 1054 1120 IPR003609 -
Pste3g03610 1542 Pfam PAN-like domain 328 394 IPR003609 -
Pste3g03610 1542 CDD EGF_CA 270 304 - -
Pste3g03610 1542 SMART blect_4 738 861 IPR001480 -
Pste3g03610 1542 SMART blect_4 13 135 IPR001480 -
Pste3g03610 1542 ProSiteProfiles Bulb-type lectin domain profile. 732 858 IPR001480 -
Pste3g03610 1542 ProSiteProfiles Protein kinase domain profile. 1223 1503 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03610 1542 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 727 858 - -
Pste3g03610 1542 ProSiteProfiles EGF-like domain profile. 995 1033 IPR000742 -
Pste3g03610 1542 Gene3D Transferase(Phosphotransferase) domain 1 488 683 - -
Pste3g03610 1542 Gene3D Transferase(Phosphotransferase) domain 1 1302 1507 - -
Pste3g03610 1542 CDD B_lectin 16 135 IPR001480 -
Pste3g03610 1542 ProSiteProfiles Protein kinase domain profile. 372 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03610 1542 FunFam Os04g0303100 protein 771 915 - -
Pste3g03610 1542 ProSiteProfiles Bulb-type lectin domain profile. 7 132 IPR001480 -
Pste3g03610 1542 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1302 1505 - -
Pste3g03610 1542 CDD STKc_IRAK 1229 1497 - -
Pste3g03610 1542 ProSiteProfiles EGF-like domain profile. 269 307 IPR000742 -
Pste3g03610 1542 ProSiteProfiles PAN/Apple domain profile. 1054 1135 IPR003609 -
Pste3g03610 1542 MobiDBLite consensus disorder prediction 1520 1542 - -
Pste3g03610 1542 CDD PAN_AP_plant 1054 1134 - -
Pste3g03610 1542 SMART serkin_6 1223 1473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03610 1542 Gene3D Hepatocyte Growth Factor 326 406 - -
Pste3g03610 1542 Gene3D Hepatocyte Growth Factor 1051 1132 - -
Pste3g03610 1542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Pste3g03610 1542 Pfam S-locus glycoprotein domain 193 305 IPR000858 GO:0048544
Pste3g03610 1542 Pfam S-locus glycoprotein domain 919 1031 IPR000858 GO:0048544
Pste3g03610 1542 Gene3D Phosphorylase Kinase; domain 1 1197 1301 - -
Pste3g03610 1542 Pfam D-mannose binding lectin 780 887 IPR001480 -
Pste3g03610 1542 Pfam D-mannose binding lectin 55 161 IPR001480 -
Pste3g03610 1542 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 3 132 - -
Pste3g03610 1542 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 166 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03610 Pste-Chr3 28397493 28413794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03610 493 709 Receptor kinase-like Gene Family AT4G05200 55.963 8.02e-73 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g03610 PK_Tyr_Ser-Thr 1.6e-46 CL0016