Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03609 ATGAAGTTATTTTCAGCTCTCCGATTATTTCTTCTGGTGACAATCCTCTACCGTTTTGGCCACTCCATCAACACCATAACCATAAACCACTCTATAAAAGACGGTGACGTTTTGATCTCCGACGACTCAGGGAACTTTGCACTCGGTTTCTTCAGCCCGCCAAACTCTACAAACCGTTATGTTGGGATATGGTACAACAAAGTCTCCCAACAAACGGTGGTGTGGGTTGCCAACAGAGACACTCCTCTTAACCACACTTCCGGTGTTCTCCAAATCAGCAACAACGGAAACCTCGTACTCCACAACAACAACAACAACACTCGAGACCTCAACCCGGTTTGGTCCACCAACGTTTCTTCCATCGAAGCCACAAACGTTTCGGCCAAGCTTTTGGACACGGGAAACCTAGTTTTAGTCCACAACCATCGCGATGATGAAGTTCTGTGGCAGAGTTTTGATTATCCCGGTAACACCATGCTTCCGTTCATGAAACTAGGCTTGGACCGCAAAACCGGTCTGAACCGCTTTTTAATATCTTGGAGATCAGCAAACGACCCCGGAACCGGAAACGTGACTTACAGAATCGATCCGAGCGGGTATCCACAACTATTTCTCTACAAAGATATGAAACCGTTTTGGAGGGTCGGGTCGTGGACGGGTGAGAGATGGAGCGGGGTACCCGAGATGACTCCGAATTTTATTTTTAACGTCAGCTACGTGAACGACGAGAACGAGGTTTCGATAATGTACGGAGTGAAGGACCCAACGGTTTTTTCGAGAATGATGCTGGACGAGACGGGGCACGTGTTCCGGTCGACGTGGCAGGAGCACGAGAAAAGATGGTTTCAGATATGGAACGCGCCGAAGGAGGAGTGCGACAACTTCAGACGGTGCGGGTCGAACGCGAACTGCGACCCGTACCACATGGATAAGTTCGAGTGCGAGTGTTTGCCCGGATTCGAACCCAAGTTCGAAAGAGAGTGGTACCTTAGAGACGGGTCGGGTGGGTGCGTGAGGAAGAAAAATGTATCCACGTGCGGGAACGGGGAAGGGTTTGTGGAGGTGGCACGTGTGAAGGTGCCTGACACGTCGAAGGCGCGTGTGGTTGCGAGGATTGGGATGAAAGAGTGCAGAGAGAGATGCTTAAGCGATTGCACGTGTGGCGCGTACACGAGTGCGAACGAGAGTTCTGAGAGTGGTTGTGTTACTTGGCACGGCGATATGGAGGACACCAGGACGTTCACGCAAGTGGGACAAAGTTTGTTCGTGCGAGTCGACAAGCTTGAATTAGCTAAATATGCAAAACATCCGTATGGTTCTCTTGGCAAGAAGGGGATGATGGCAATTTTAACCGTTGCTATTTCCTTGTTTTTGTTTTTGGCAATCAGTTTCGTGTACTGGTTTGTTAAAAACAGGAAACAGGGAATGACAAGGGCTCGCAAGTTTTCCTTTCCTCTTCTTAGCTTGGAAGACTCTACCAGTCTACACGAATTTGACACTACGAAAAATTCAGACTTACCATTCTTTGATTTTAGCTCCATAGCTGCTGCAACAGACAATTTTTCTGAAGCTAAAAAGCTTGGCCAAGGCGGTTTTGGTTCTGTTTATAAGGGTCTATTGAGTAATGGAATGGAAATAGCAGTAAAGAGACTATCAAAGCACTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTTGTTTTGATCTCAAAGCTCCAACACAGGAATCTTGTGAGGATCTTAGGTTGCTGCATTCAAGGAGACGAGAAGATGTTAGTCTATGAGTATTTGCCTAACAAAAGTTTGGACTCTTTAATTTTTGATGAATCCAAAAGGTCCCAACTAGACTTGAAAAAACGATTTGATATCATCTGTGGAATAGCTAGAGGGATCCTATACCTTCATCAAGATTCACGGTTGAGAATCATTCATAGAGACCTAAAAGCCAGCAATGTCTTGCTGGACTCTGCATTGAACCCCAAAATTGCAGATTTTGGTATGGCTAGAATATTTGGTGGAGACCAAATTGAAGCAAATACAAATCGTGTTGTTGGAACCTATGGCTATATGTCACCAGAATATGCCATGGAGGGACAATTTTCAATAAAGTCTGATGTTTACAGCTTTGGAGTTTTACTTCTAGAGATTGTTACAGGCAGAAAGAATGGCGGCCAATATGAAGACATCACAGTCACAAATTTAGTTGGACATATATGGTATCTATGGAGGGATGGCAGAACCATGGAGATTGTTGATCAATCGTTGGGAGAGTCATGCTCTGAATATGAAGTCCAAAGATGTATCCAAATTGGTCTTTTATGCGTGCAAGATTATGCTACTGATAGACCATCTATGTCAGCTGTTGTTTTCATGTTGGGTAATGACTCAACTCTTCCAGATCCAAAACAACCAGCATTTATTTTCAAGAAAACTAATAATGAGAGTTCAACCAGTGAAGGAGTTTATTCAGTAAATGATGCAAGTATAACAATGATTGAAGCTCGCTGA 2508 0.4474 MKLFSALRLFLLVTILYRFGHSINTITINHSIKDGDVLISDDSGNFALGFFSPPNSTNRYVGIWYNKVSQQTVVWVANRDTPLNHTSGVLQISNNGNLVLHNNNNNTRDLNPVWSTNVSSIEATNVSAKLLDTGNLVLVHNHRDDEVLWQSFDYPGNTMLPFMKLGLDRKTGLNRFLISWRSANDPGTGNVTYRIDPSGYPQLFLYKDMKPFWRVGSWTGERWSGVPEMTPNFIFNVSYVNDENEVSIMYGVKDPTVFSRMMLDETGHVFRSTWQEHEKRWFQIWNAPKEECDNFRRCGSNANCDPYHMDKFECECLPGFEPKFEREWYLRDGSGGCVRKKNVSTCGNGEGFVEVARVKVPDTSKARVVARIGMKECRERCLSDCTCGAYTSANESSESGCVTWHGDMEDTRTFTQVGQSLFVRVDKLELAKYAKHPYGSLGKKGMMAILTVAISLFLFLAISFVYWFVKNRKQGMTRARKFSFPLLSLEDSTSLHEFDTTKNSDLPFFDFSSIAAATDNFSEAKKLGQGGFGSVYKGLLSNGMEIAVKRLSKHSGQGIEEFKNEVVLISKLQHRNLVRILGCCIQGDEKMLVYEYLPNKSLDSLIFDESKRSQLDLKKRFDIICGIARGILYLHQDSRLRIIHRDLKASNVLLDSALNPKIADFGMARIFGGDQIEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIVTGRKNGGQYEDITVTNLVGHIWYLWRDGRTMEIVDQSLGESCSEYEVQRCIQIGLLCVQDYATDRPSMSAVVFMLGNDSTLPDPKQPAFIFKKTNNESSTSEGVYSVNDASITMIEAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03609 835 SUPERFAMILY Protein kinase-like (PK-like) 506 814 IPR011009 -
Pste3g03609 835 Pfam Domain of unknown function (DUF3403) 794 835 IPR021820 GO:0004674
Pste3g03609 835 CDD B_lectin 29 155 IPR001480 -
Pste3g03609 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 152 - -
Pste3g03609 835 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Pste3g03609 835 Pfam D-mannose binding lectin 72 181 IPR001480 -
Pste3g03609 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 487 596 - -
Pste3g03609 835 CDD EGF_CA 291 323 - -
Pste3g03609 835 ProSiteProfiles Bulb-type lectin domain profile. 23 151 IPR001480 -
Pste3g03609 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Pste3g03609 835 CDD PAN_AP_plant 344 425 - -
Pste3g03609 835 Gene3D - 20 152 IPR036426 -
Pste3g03609 835 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 597 800 - -
Pste3g03609 835 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Pste3g03609 835 ProSiteProfiles PAN/Apple domain profile. 346 426 IPR003609 -
Pste3g03609 835 ProSiteProfiles Protein kinase domain profile. 521 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03609 835 CDD STKc_IRAK 527 792 - -
Pste3g03609 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 186 IPR036426 -
Pste3g03609 835 SMART serkin_6 521 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03609 835 Gene3D Transferase(Phosphotransferase) domain 1 597 803 - -
Pste3g03609 835 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 784 - -
Pste3g03609 835 Pfam S-locus glycoprotein domain 213 324 IPR000858 GO:0048544
Pste3g03609 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Pste3g03609 835 SMART blect_4 29 155 IPR001480 -
Pste3g03609 835 Pfam PAN-like domain 346 410 IPR003609 -
Pste3g03609 835 Gene3D Phosphorylase Kinase; domain 1 495 596 - -
Pste3g03609 835 ProSiteProfiles EGF-like domain profile. 288 326 IPR000742 -
Pste3g03609 835 SMART ntp_6 347 425 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03609 Pste-Chr3 28389866 28396730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03609 509 835 Receptor kinase-like Gene Family AT4G11530 59.644 3.80e-131 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g03609 PK_Tyr_Ser-Thr 1.3e-48 CL0016