Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03608 CTCTTCTCATTTTATAGCTAATGTCAAAGTGTTTATAATAAAGTGTGAATTTTAAGGGAATAGAGGGGAAGGTTTTGTTGTTAAGCAGAGGGGCGTCTAAACCCAAACAACATACCGACAGGCGCAAGAATTTGTTGATTGAGTCTCACGTGAAGTTTTATCTTTATGCAGATCTGAAAGGGATGAATCCAAACCATGGATCTTACGGCTTCAAACAAATTGGATGCACCACCACCACCCAGCTTGAGCTTTCTAACATCGTGTTACTCATTACTGCTTCCTGCTGTTACCACTCAACCTTTTCACTCTCTTTCATTCGCCACATGTCAATATTATAATCACACCCACATACCAACCTCATTCCACTCTTCCCCAACACAACCTCAAGATAAACTAACTATTTTCTTACATTTATATCACTCTTTTTAAATATTAATAAAATAAATTAACAATATTAAATAAAAAAGAAGTTTAATAATATCTTTTTATTACCAGCAAAGAGTCAGTTGTGTAAAAAGGGGCGTTTCTACAGGCAAAAGCCCCACAGGTTTTGGGTCTGTTGTTTGAATTTTTATTAAAAATGAAAAATAGTTTTTGAACAAGTCCAGGGTAGTTAGGTAATTATGACGAGAAATAGTGTTGTGTTGAATGTTCATGCACTGACACGCACCCTTTTTAAGGTTAGCTGTTGCGAGGAGTTTTACTCACGTTGCTTCTGATCTGTGTGTTGTTGCGGGCGACAAACCGAGTCAGATACAGAGGGAGAGGGAGGAACACAGAGACACAGAACCGAAGACAATAAAAGCTAGGGAACCTCTCTCTCTCTCTCGCCATCATCATCATCATCATCATCATCATGTTCTCCTCAACTAGATGCGCTTTTCTGAGCAACTCAGGGTTAGGTGGGTGCAGCAGCATCTGTGATGCGCAGAGAAGGCGCTCAACTCCTTTCAGGGTGGTGTGTATGACTCCAAGCAGCAGCATGTCTGCAGATAGAAACAGCAGCGTTGTGATGGAGACGCCGTTGAAAGAATTGAAAAAGGAAGCCACGGTGGCTGACGTGGAGGATAGCGCCATCTCTGCCGGTGGCCCTCAAGATGTGTACGGCGAGGATAGGGCTACGGAGGATCACTTTGTTACCCCTTGGAATGTCTCTGTTGCCAGTGGCTATACATTGTTGCGAGATCCCCACTTCAACAAAGGGCTAGCCTTCAGTGAAAAAGAAAGGGATGCTCACTATTTGCGTGGTCTTCTTCCCCCATCAGTTATTCCTCAAGAAACTCAGGTGAAGAAAATGATACAGCACGTACGCCAGTATCAAGTTCCTTTGCAGAAGTACATGGCGATGATGGATCTTCAGGAGAGAAATGAACGACTATTTTACAAACTTCTTATTGATCATGTTGAAGAGTTACTCCCAGTTGTATATACTCCAACTGTTGGTGAAGCTTGCCAGAAATATGGGAGCATCTTTATGCGTCCTCAAGGTCTTTATATAAGTTTGAAAGAGAAGGGAAAGATCCGTGAAGTACTAAGGAATTGGCCTGAGAAGAACATTCAGGTCATAGTTGTAACTGATGGAGAACGGATCCTGGGTCTTGGGGATCTTGGTTGTCAGGGGATGGGAATACCGGTGGGAAAACTCTCTTTATATACCGCACTTGGAGGAGTCCGACCTTCTGCTTGTTTGCCAATTACCATTGACGTGGGTACAAACAATGAGAAGTTGCTGAATGATGAATTATATATTGGGCTAAAGCAAAGACGAGCAACTGGGAAGGAATATGCTGAACTTATACATGAATTTATGACGGCAGTCAAACAAACTTATGGGGAAAAGGTCCTAATTCAGTTTGAGGACTTTGCAAATCACAATGCTTTTGATCTGCTTGAGAAATATAGATCGACGCATCTGGTCTTTAATGATGATATTCAGGGAACAGCATCTGTGGTTCTTGCTGGACTAGTTGCTGCTTTGAAATTGGTAGGGGGGAACTTAGCTGATCATAGATTCTTATTCCTTGGTGCAGGAGAGGCTGGCACTGGAATAGCAGAACTCATAGCACTTGAAACATCAAAACGGACAAATGCACCACTGGAGGAAGTGCGCAAGAATATTTGGCTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGTAAAGATTCACTACAACATTTTAAGAAGCCCTGGGCTCACGAGCATGAACCTGTTAAAAATCTTGTAGATGCGGTTAAGAAAATTAAGCCAACAGTGTTGATTGGAACATCGGGACAAGGAAGAACTTTTACTAAAGAGGTAGTTGAGGCCATGGCCTCTATTAACCAGAGACCTATTATTCTTTCTCTTTCCAACCCGACGTCACAGTCAGAATGTACTGCTGAAGAAGCATACAAGTGGAGCCAGGGACGTGCCATTTTTGCAAGTGGGAGCCCATTTCCGGCAGTTGAGTATGATGGGAAAGTGTTTGTGCCTGGCCAGGCCAATAATGCATACATATTTCCTGGATTCGGTCTGGGTTTAATAATGTCTGGGACCATTAGAGTGCATGATGACCTGCTTCTGGCTGCCTCTGAGGCTCTGGCTGCACAAGTGAGCCAAGACAACTTTGATAAGGGACTCATATTCCCACCATTCACCAACATCAGAAAGATATCAGCACACATAGCTGCCAATGTTGCCGCCAAGGCTTACGAGCTTGGCTTGGCCACCCGCTTACCTCAACCTAAAGATTTGGTGAAGTTTGCTGAGAGCTGTATGTATACTCCAACCTACAGAACCTACCGGTGAAAGAAGTGATACATAATAGCCCCATTTTCTTTTTCATTTATCATCATATCATTATCATTTTGTTGTCAATTTTTTTATTTTTTCTTGTGTTAAATGTTAATTAATTTGTATTGGGTGGGTTAGTACTTGGTAGGCTAGGACGGTGGTGGTACTGGTAGTTGTAGTTGGACTATATATAAGGTAGCTTGAAATTTTCCGTTTCGATATAAATGTTATGTGACAGTAATCAAAATTAGAAAAGGAAGCATTTCTAAAATAACATTGATCTTTCTTTCGAGTGCAAAATGGCATAAATCTGGTATACCCATGATAGGCAATATAGAAAA 3114 0.4191 MFSSTRCAFLSNSGLGGCSSICDAQRRRSTPFRVVCMTPSSSMSADRNSSVVMETPLKELKKEATVADVEDSAISAGGPQDVYGEDRATEDHFVTPWNVSVASGYTLLRDPHFNKGLAFSEKERDAHYLRGLLPPSVIPQETQVKKMIQHVRQYQVPLQKYMAMMDLQERNERLFYKLLIDHVEELLPVVYTPTVGEACQKYGSIFMRPQGLYISLKEKGKIREVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNEKLLNDELYIGLKQRRATGKEYAELIHEFMTAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHRFLFLGAGEAGTGIAELIALETSKRTNAPLEEVRKNIWLVDSKGLIVSSRKDSLQHFKKPWAHEHEPVKNLVDAVKKIKPTVLIGTSGQGRTFTKEVVEAMASINQRPIILSLSNPTSQSECTAEEAYKWSQGRAIFASGSPFPAVEYDGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAAQVSQDNFDKGLIFPPFTNIRKISAHIAANVAAKAYELGLATRLPQPKDLVKFAESCMYTPTYRTYR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03608 643 SMART Malic_M_2 359 612 IPR012302 GO:0051287
Pste3g03608 643 Gene3D - 102 356 IPR037062 GO:0004471
Pste3g03608 643 CDD NAD_bind_1_malic_enz 359 637 - -
Pste3g03608 643 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pste3g03608 643 Pfam Malic enzyme, N-terminal domain 168 349 IPR012301 GO:0004471
Pste3g03608 643 ProSitePatterns Malic enzymes signature. 355 371 IPR015884 GO:0004471
Pste3g03608 643 PIRSF ME 58 643 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 Pfam Malic enzyme, NAD binding domain 359 611 IPR012302 GO:0051287
Pste3g03608 643 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 359 643 IPR036291 -
Pste3g03608 643 PRINTS Malic enzyme signature 270 292 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 386 402 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 489 505 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 355 371 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 174 198 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 234 263 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PRINTS Malic enzyme signature 330 348 IPR001891 GO:0004470|GO:0004471
Pste3g03608 643 PANTHER MALIC ENZYME-RELATED 71 642 - -
Pste3g03608 643 SMART malic_2 168 349 IPR012301 GO:0004471
Pste3g03608 643 FunFam Malic enzyme 357 643 - -
Pste3g03608 643 Gene3D - 357 643 - -
Pste3g03608 643 FunFam Malic enzyme 102 356 - -
Pste3g03608 643 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 82 358 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03608 Pste-Chr3 28388192 28394039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g00804 6 3090607 3095432 Pste3g03608 3 28388192 28394039 ECH
Pste3g00478 3 2745436 2750270 Pste3g03608 3 28388192 28394039 ECH
Pste2g02276 2 22921205 22925768 Pste3g03608 3 28388192 28394039 ECH
Pste3g03608 3 28388192 28394039 Pste3g03608 3 28388192 28394039 ECH
Pste3g03608 3 28388192 28394039 Pste2g02276 2 22921205 22925768 ECH
Pste3g03608 3 28388192 28394039 Pste6g00804 6 3090607 3095432 PCT