Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03606 ATGACTCGGAGGTGCTCCCAATGCAGCAACAACGGGCATAACACGAGGACGTGCCCGGGAAGGGAGAGAGGTGTTAAGCTGTTCGGTGTGAGGCTTACAGATGGATCTATGATTAAGAAGAGCGCCAGCATGGGAAACCTAATCCTCTCTTCCTCTCCTCCTCCTCCTCCCAATCCTTGCTCCCTTGGTTACCTGTCCGACCACCTCTCCCCCTCTCTCTCTCTCAGAACAAAGGGTGTTCCATGGACTGAAGAAGAACATCGTCTCTTCTTAATTGGTCTCCAGAAGTTGGGCAAAGGAGACTGGCGTGGTATTGCACGCAATTTTGTTTTATCAAGGACCCCTACTCAGGTTGCTAGTCATGCCCAGAAATATTTTATCCGCCTGTCTCATGCATCCAGGCGTAAGAGACGTTCCAGCCTTTTTGACATGCTTCCCCATATGTCTTCAGATCCACCTTCACTGCCAGATGAACAATTGCTGCTTCCACCTTCTGAAAACTCACAACCTTGTAATGGAAAATCACAGCCTTCATTAAATCTCTCCCTCATATCCGAATTTGAACCCATGGAAACTACTTGTCAAGAAAATGTGCAACAGACCAATGGAACTATGATCAGATCAAACGTACTCACACCAATGGCTACTCAAGGATTCTTCCCCGCATATTTACCTGTTCCGTATACCTTTTGGCCATCAACTGCAGCTCCCCCGATTGAACAAGTTAAGGGAGGAGATACTTCTCATCATCAGGTCCACAAGCCAATCCCAGTCATTCCCAATGAACCTGTCAATGTTGACCAACTTGTTGGAATGTCTCATCTCCGCATTGGGGAAACGCAGGGTCGTGATAGACAACCTTCCCCACTTTCCTTAAACTTGTTAGGAGAGCCCTCAAGACAGTCAGCATTCCATACGAATGCTCCAGTTGCTAGTTCGGAGTTAAAAACTCGCAAGAACAATGCAATTCAAGCCGTCTCAGTTGAGCTTTTAAGGTCTGCTGAAGACAGCACAAGTAATAAGCCTTCTTTTCATCATCTTTTTCATTTGTACTATCATTTTTTTTTTTGA 1071 0.4603 MTRRCSQCSNNGHNTRTCPGRERGVKLFGVRLTDGSMIKKSASMGNLILSSSPPPPPNPCSLGYLSDHLSPSLSLRTKGVPWTEEEHRLFLIGLQKLGKGDWRGIARNFVLSRTPTQVASHAQKYFIRLSHASRRKRRSSLFDMLPHMSSDPPSLPDEQLLLPPSENSQPCNGKSQPSLNLSLISEFEPMETTCQENVQQTNGTMIRSNVLTPMATQGFFPAYLPVPYTFWPSTAAPPIEQVKGGDTSHHQVHKPIPVIPNEPVNVDQLVGMSHLRIGETQGRDRQPSPLSLNLLGEPSRQSAFHTNAPVASSELKTRKNNAIQAVSVELLRSAEDSTSNKPSFHHLFHLYYHFFF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03606 356 MobiDBLite consensus disorder prediction 1 20 - -
Pste3g03606 356 MobiDBLite consensus disorder prediction 1 17 - -
Pste3g03606 356 Pfam Myb-like DNA-binding domain 81 126 IPR001005 -
Pste3g03606 356 PANTHER TRANSCRIPTION FACTOR KUA1 3 232 - -
Pste3g03606 356 SMART sant 78 128 IPR001005 -
Pste3g03606 356 NCBIfam myb-like DNA-binding domain, SHAQKYF class 78 128 IPR006447 GO:0003677
Pste3g03606 356 ProSiteProfiles SANT domain profile. 82 130 IPR017884 -
Pste3g03606 356 FunFam transcription factor MYB1R1 80 131 - -
Pste3g03606 356 Gene3D - 80 131 - -
Pste3g03606 356 SUPERFAMILY Homeodomain-like 75 130 IPR009057 -
Pste3g03606 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 130 IPR017930 -
Pste3g03606 356 ProSiteProfiles Myb-like domain profile. 81 126 IPR001005 -
Pste3g03606 356 CDD SANT 81 126 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03606 Pste-Chr3 28367058 28368464 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste3g03606 Myb_DNA-binding 8.6e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03606 3 28367058 28368464 Pste3g03606 3 28367058 28368464 ECH