Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03600 ATTGCTGAGTGATACCAGGTTTACAGAGAGCACATAACTGAAGAAGTTGTAGCAAACCTTAAAGATACAAAACAAATCAGAAATATTTTGAGAAGAATAAATAAAGCGCTCGCCATGGCTGAGGAGTTTCAAGCTAGGATTTGTGGCGAAAACTGGTGGAGTAGTACTATTGATTCAACTAGAAGTGTGTTCCCTCTTAGCTCATCTTCCATATCTTCTCCTTGTTCCGTGGCAGCTATTGATGCAGGAAACTATAGCACTCGCCAAACTACTAACTCAGATTTGAAGGCAGCAAAGTGTGGTGCTGAAGAGACTACTAACAGTTTGGTTTCTGATACTTATCTGGGTTTTGTTGATGCACAGAAGCCACATAAGAGTGAACCAGCCAGTGGAAGTGGTGGCATGTTGATCGATTCCACCTTACAGATGATGGGTTTTGGCCTCACAGCTTCAACATCAGAGAATTGGAATCAACCTCTATTATTTCGTTGTAATGGAAGGGCAGAGAGCAATTTCCACTCCGTGATTCATGAAGAAACAGGAATAGATTCTTCTAATTCACAAAACCATAGGGATTGGATCCCAAAGAGCTTCAACCAAATTGATAATTTGAAGCCACTGAACCAAGAGTTTTCATTAGATAATCACCATCAGAGTCCAAGTTCTTTAGCCGCCACTGGATTATCATCAAATAGTGGATTCCCAATTGGATCAGCCTGGTACGGTAACCCTTCAACGTTACAAAGCTTATATGATCCTAATCCTAATCCTCATCCACAACTACAACACTCACTTTTCACCAACCGTCCCATGTCCTATTCATCAAAAGCATGTTATGGGACACCCTGCACTGAACTACCGCCAACATGGTCTAAAGTCTCTACTTTTTTGAAGCCCACAACAATCGCAAAACAACACCCTATTGGACTTCACTTTTCTAACAACACTCCTTTCTGGAATGCTCCCGCCGAGGCACCTAACGACATAAGAGTTGGTGCTTTTGCTTCATCACAATCACAATACCAAGCACCAACATTTGAAGCCAAACTCAATTGCCCAAGTACTCTATTAAACGAGTTCAACAGTGAAGAAACTCTAGACTCAGGATCCATGGCGAAGAAAAATGTTTGTGAACCAGTCCTAAAGAGGTCAAGAATTGAAACTCCGTCTCCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGGGTCACTGCTCTTCAGCAATTGGTTTCACCTTTCGGAAAGACCGACACCGCATCCGTTCTTCACGAAGCCATTGAGTACATTAAGTTCCTTCATGAACAAGTCAATGTTTTAAGTACCTCATATATGAAAAATGGAGCTCCCATTCAACAGAGGCAGGGGTGTGATGATGTGAAAGACTCAGAAGGACCACAAAAAGATTTGAAAAGTCGAGGGCTGTGTTTGGTACCAATTTCAAGCACATTTCCAGTGGCAACAGAAACCACTAGTGCTGCTGAATTGTGGACGCCTACATTCAGAGGCGCACTCTTAAGATAATAATAAAGCCAAAGGGACTCGACCAGTGGCAAAATTGATGACGTATTATTAACTATTTGCATGTGTAAGAGGATGATGAAGCAAATGTGAAGGCACAGTTGCTGAAGAGAAAAGCTGAAGAAAACAAAGGATGAAAAGAAAAGGAAAAGTGAGAAAAGAAACAAACGAAGTGACCCTTCAAAGAAGAGCAGGGAATGCTGGGCCAGTCTCAACTCTCGAGCAGAATGATGTGCTCTTGCAAATGATTAGTCACCACTGCAAGGAGAATAGAATATATATAGTTTATTAACTGGTTGATCCATGGTTAATATATATTATATAACCCCCAATCTTACTTAATTAAGGGTTGGTGAGAGTAGGAACCAATACTAAATTCACTTACATTTGACGACATTAGTTATACATGATTTGTTGCTGCTTCAGGTAGAGAATAT 1964 0.4104 MAEEFQARICGENWWSSTIDSTRSVFPLSSSSISSPCSVAAIDAGNYSTRQTTNSDLKAAKCGAEETTNSLVSDTYLGFVDAQKPHKSEPASGSGGMLIDSTLQMMGFGLTASTSENWNQPLLFRCNGRAESNFHSVIHEETGIDSSNSQNHRDWIPKSFNQIDNLKPLNQEFSLDNHHQSPSSLAATGLSSNSGFPIGSAWYGNPSTLQSLYDPNPNPHPQLQHSLFTNRPMSYSSKACYGTPCTELPPTWSKVSTFLKPTTIAKQHPIGLHFSNNTPFWNAPAEAPNDIRVGAFASSQSQYQAPTFEAKLNCPSTLLNEFNSEETLDSGSMAKKNVCEPVLKRSRIETPSPLPTFKVRKEKLGDRVTALQQLVSPFGKTDTASVLHEAIEYIKFLHEQVNVLSTSYMKNGAPIQQRQGCDDVKDSEGPQKDLKSRGLCLVPISSTFPVATETTSAAELWTPTFRGALLR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03600 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
Pste3g03600 471 CDD bHLH_AtbHLH_like 354 405 IPR045239 -
Pste3g03600 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 358 415 IPR036638 GO:0046983
Pste3g03600 471 Gene3D - 358 420 IPR036638 GO:0046983
Pste3g03600 471 FunFam Transcription factor bHLH123 family 358 420 - -
Pste3g03600 471 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 162 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03600 Pste-Chr3 28272656 28277153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03600 236 469 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 45.455 2.37e-47 166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03600 3 28272656 28277153 Pste2g01852 2 18871798 18874527 PCT