Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03599 ATGGGCAAAGCTACAAGGTGGTTGAAGGGGTTGTTGGGAAAGAAGAGAGAGAAGGACTACTGTGGCTATTCAGGCTCATTGGATCTTGACAGATGTGAAAAGAAACGACTAGGTAAGGATGAAGAGAGTCACATTACTCATACTAGTGTTAGTGCCTTTGATCATACTAGGCACAGATCCTATGTTGCTGAAAAAAAGAACGTGAAAAACAAACACACAATTGATGTGGCTCTTGTGAGGTCAAGAAACTGTGAAAGAGGCATATTTCTTATTGGAAGCAGGGAGGGTTGCGCTGCTGTCAAAATCCAATCCTTTTTCAGAGGTTATTTGGCGCGAAAGGCACTTCGAGCACTAAAGGGATTGGTTAAGATACAGGCTCTAGTTAGAGGTTATCTAGTTCGAAAAAGGGTGGCTGCAACTCTTCATAGTGTGCAAGCTATGATAAGGGCTCAAGCTGTTGCTAGATCAGTGCGAGCTCGTCGTTCCATGGACAAGGAGAATAGATTTCATCCACAAAGTTCTTGCAGAAAATACGTGGAACAGTTTATTGAAACAAGAAATGAATCACACAATAGAAGGGTACCCGTGTATTGTAAGGCACCCTTGAATAGATATGATGGGTTTCCAAAAGTTGTTGAGGTTGACACTCACATACCCCATTCAAGGTGTAGGAGCATTAACACTGCAATGTCTGAATGTGGAGAAGACCTGCGCTATCAAGCAATATCATCCTCTCTTGGTTGCCCAGTTCAAGGTCGAATTTCACTTCATGAGAACCAGCACCCTCAAGAGTTTGAATGGTACTTCAATGTTGATGAAGGTAACAAGTTCTCCACAGCACACAACACCCCTCGTTTACCCAAATGTATTCTACCAAATACCCCAGGTACTCCATTGAAGAGTGTTATCGGAGAAGCATGCTTTAGGCCTTACTCCAATTTCCCTAGCTACATGGCCAATACTCACTCTTCTAAGGCCAAACTAAGGTCTCATAGCGCTCCAAAGCAAAGACCTGAACTCAAGAAAAGGCTTTCGATCAACGAAATCATGGCAGCCAGAAATAGTGTTAGTGGTGCTAGAATGCACTGGTCATCATCCAATCCAAAACCTCAAGATTACTATTTTTTTGACAAGGTTTTTTAG 1143 0.4261 MGKATRWLKGLLGKKREKDYCGYSGSLDLDRCEKKRLGKDEESHITHTSVSAFDHTRHRSYVAEKKNVKNKHTIDVALVRSRNCERGIFLIGSREGCAAVKIQSFFRGYLARKALRALKGLVKIQALVRGYLVRKRVAATLHSVQAMIRAQAVARSVRARRSMDKENRFHPQSSCRKYVEQFIETRNESHNRRVPVYCKAPLNRYDGFPKVVEVDTHIPHSRCRSINTAMSECGEDLRYQAISSSLGCPVQGRISLHENQHPQEFEWYFNVDEGNKFSTAHNTPRLPKCILPNTPGTPLKSVIGEACFRPYSNFPSYMANTHSSKAKLRSHSAPKQRPELKKRLSINEIMAARNSVSGARMHWSSSNPKPQDYYFFDKVF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03599 380 Gene3D - 121 169 - -
Pste3g03599 380 Gene3D - 55 120 - -
Pste3g03599 380 ProSiteProfiles IQ motif profile. 98 123 IPR000048 GO:0005515
Pste3g03599 380 PANTHER IQ-DOMAIN 5-RELATED 1 352 - -
Pste3g03599 380 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Pste3g03599 380 Pfam IQ calmodulin-binding motif 122 136 IPR000048 GO:0005515
Pste3g03599 380 SMART iq_5 94 116 IPR000048 GO:0005515
Pste3g03599 380 SMART iq_5 117 138 IPR000048 GO:0005515
Pste3g03599 380 Pfam Protein of unknown function (DUF4005) 276 358 IPR025064 -
Pste3g03599 380 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03599 Pste-Chr3 28257603 28259157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03599 1 361 IQD Protein Family AT3G16490 43.511 1.49e-83 258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03599 3 28257603 28259157 Pste3g03599 3 28257603 28259157 ECH
Pste3g03599 3 28257603 28259157 Pste6g00837 6 3226118 3228241 PCT