Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03588 GCTCCATTTATTCGTGCTCAGGATCAATCAGGATTCATCAGCATAGATTGCGGAGCTCTAGCAGGTGTCAACTATACCGAGTTAACAACAGGCATAAATTATATTTCAGATACAGATTTCATAAATACTGGTGTGGGAAAAACCATCGTGTCTGAACTCAGAAATAAGTATCCACGACAAACATGGAGAGTAAGAAGTTTCCCGAAACAAAAAAGAAATTGCTACAAAATAAACATCACAAGAGGTTTTAAGTATCTCATCCGGACTGGTTTTTTGTATGGAAATTATGATGGCCTAAATATATTACCACAATTTGATCTTCTTCTTGGAGCTAACCGATGGCTTACCGTTACCATACAAAATGTATCATCTGCCCAAACCAATGAGATAATATATATACCTTCACTGGATCACATACATATATGTTTAGTTAACACAGGTCACGGAACACCATTTATATCATATATAGAATTAAGAACTTTGAAAGATGATATTTATGTAACTCAATTTGGATCATTGGAAACTTATTTTCGGGCAGATTTAGGTTCAAACATAACCTACAGGTACAAAGATGATGTTTATGACCGTCTCTGGAATACCTATAGCAATAAGGAATTGACACAGTCAAGTGCTCTTATAGTCCCTAATTCTTTAGATCATAATAACAATGATTACAATCTGCCAGTAATTGTCATGAGCACTGCTGCTACACTTGTAAATGCTAGTGCCCCATTTATAATAAGTTGGCAGCCACAAAATAAAAGTGAGCAATTTTATGTTTACATGCACTTCATGGAGATTCAAGTATTAGCAAATAATCAGAAAAGACAATTCAGCATCATGTGCAACGGTGAACCAGTGATTCAAAATTTTTCTCCACAATACCATGCTGTCAACACTTTTTATAGCTCATCATCATCGATCAGTGGAAAAGAAATTAAATATTCGCTTGAGAAGACACAAAATTCAACCCTTCCTCCCATTATCAATGCTATTGAAATTTATAAATTAATAAACTTCCAACAATCAGATACGAACCAAGGAGATGTTGATGCGATTACAACCATCAAGTCAATTTATAGTTTGACAAGAAATTGGCAAGGTGATCCATGTGGTCCTTCAGACTATATCTGGTATGGTTTGAACTGTACTTATGATAAAGATATATCCACAAGAATTATAATTTTAAATTTATCTTCAAGTGGATTATCAGGAAAAATAGATTCTTCCATCTCAAATCTCACTATGTTGGAGAAATTGGATTTATCAAATAATAATTTAAACGGTGAACTTCCTGATTTTCTCTCTCAATTACAACACTTGAAAATCCTAAACTTAGATAACAATAACCTTTCTGGTTCAATTCCATCTGCACTTGTTGAAAAATTTGAAGAAGGTTCTCTCTTATTAAGTGTGGACAAAAACCCATATTTATGTGAATCCGGTCAATGCAACAAGAACAATAAAAATAACATTATTATGTTCTTAGTAGCATCAATTTGCACGGTTTGGATTCTTCTGGCGGCAGTGACAACTATTTTGTACCTCAATGAAATGAGAAAATCGAAAGCTTCATTGCTAGAAAAAGATCAAAGTGAGATATCAATGGAATTTAAAAAACAAATATATTCATACTCAGATGTGGTTAAAATTACCAATAATTTCAATACAATTATTGGTAAAGGAGGATTTGGAATAGTTTACTTGGGCTATATTGATGACATTCAAGTTGCAGTAAAAATGTTTTCTCCATCATCTGTTCATGGCTATCAACAATTTCAAGCGGAGGTTAAACTTCTAATGAGAGTTCATCATATAAATTTGACTTCCCTTATTGGTTATTGTAATGAAGGAGTCAATAAAAGTCTCATATATGAATACATGGCTAATGGAAACTTACAAGAACATCTCTCTGGTCAAAACAACAAATCAAAATTTCTAAGTTGGGAAGATAGACTTCGTATAACATTGGATGCAGCTTTAGGATTAGAGTATCTGCATAGTGGTTGCAAGCCTCCTATAATTCACAGAGACATAAAATCTACAAACATCTTGTTGAATGAACACTTTCAAGCAAAATTATCTGATTTTGGTCTATCCAAAGTTATACCAATTGATGGAGAATCTCATGTGTCAAGTGTTATTGCTGGCACTCCTGGTTACCTAGACCCTGACTACTACATATCCAATATATTAACAGAGAAAAGTGATATCTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACAAGTCAACCCTTACTGTCAACAAATCAAGAAAGGACTCATATAATTCAACGAGTTAGATCCCTAATTAAAACAGGAGATATTGAGACCATTGTTGACTCAAGGTTAGCAGGAGACTTTGATATTAACTCGGCTTGGAAAGCTATAGAAATAGCAATGAGTTGTATTTCTCTAAATCCCAACAAAAGGCCAAGCATGAGTGTCATAATAATTGAACTAAAGGAGACTTTAGCAACTGAATTAGCTAGAACAAAACGTAATAGTAGTTTGGATTCCATATATATAGATGAATCTGATAATGTGAATCTGGACACCAAATTCATACCCCTTGCTAGG 2583 0.3372 APFIRAQDQSGFISIDCGALAGVNYTELTTGINYISDTDFINTGVGKTIVSELRNKYPRQTWRVRSFPKQKRNCYKINITRGFKYLIRTGFLYGNYDGLNILPQFDLLLGANRWLTVTIQNVSSAQTNEIIYIPSLDHIHICLVNTGHGTPFISYIELRTLKDDIYVTQFGSLETYFRADLGSNITYRYKDDVYDRLWNTYSNKELTQSSALIVPNSLDHNNNDYNLPVIVMSTAATLVNASAPFIISWQPQNKSEQFYVYMHFMEIQVLANNQKRQFSIMCNGEPVIQNFSPQYHAVNTFYSSSSSISGKEIKYSLEKTQNSTLPPIINAIEIYKLINFQQSDTNQGDVDAITTIKSIYSLTRNWQGDPCGPSDYIWYGLNCTYDKDISTRIIILNLSSSGLSGKIDSSISNLTMLEKLDLSNNNLNGELPDFLSQLQHLKILNLDNNNLSGSIPSALVEKFEEGSLLLSVDKNPYLCESGQCNKNNKNNIIMFLVASICTVWILLAAVTTILYLNEMRKSKASLLEKDQSEISMEFKKQIYSYSDVVKITNNFNTIIGKGGFGIVYLGYIDDIQVAVKMFSPSSVHGYQQFQAEVKLLMRVHHINLTSLIGYCNEGVNKSLIYEYMANGNLQEHLSGQNNKSKFLSWEDRLRITLDAALGLEYLHSGCKPPIIHRDIKSTNILLNEHFQAKLSDFGLSKVIPIDGESHVSSVIAGTPGYLDPDYYISNILTEKSDIYSFGVVLLEIITSQPLLSTNQERTHIIQRVRSLIKTGDIETIVDSRLAGDFDINSAWKAIEIAMSCISLNPNKRPSMSVIIIELKETLATELARTKRNSSLDSIYIDESDNVNLDTKFIPLAR 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03588 861 ProSiteProfiles Protein kinase domain profile. 553 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03588 861 FunFam Leucine-rich repeat receptor-like kinase 349 481 - -
Pste3g03588 861 SMART serkin_6 553 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03588 861 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Pste3g03588 861 ProSitePatterns Protein kinases ATP-binding region signature. 559 580 IPR017441 GO:0005524
Pste3g03588 861 CDD STKc_IRAK 559 824 - -
Pste3g03588 861 SUPERFAMILY L domain-like 357 459 - -
Pste3g03588 861 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Pste3g03588 861 Gene3D Phosphorylase Kinase; domain 1 535 627 - -
Pste3g03588 861 Gene3D Ribonuclease Inhibitor 351 467 IPR032675 -
Pste3g03588 861 Gene3D Transferase(Phosphotransferase) domain 1 628 849 - -
Pste3g03588 861 Pfam Malectin-like domain 15 336 IPR024788 -
Pste3g03588 861 SUPERFAMILY Protein kinase-like (PK-like) 534 820 IPR011009 -
Pste3g03588 861 Pfam Protein kinase domain 557 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03588 861 PANTHER OS07G0107800 PROTEIN-RELATED 13 826 - -
Pste3g03588 861 Gene3D - 173 338 - -
Pste3g03588 861 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 628 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03588 Pste-Chr3 28182878 28187966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03588 6 861 Receptor kinase-like Gene Family AT1G51800 46.925 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pste3g03588 Malectin_like 3.9e-108 CL0202