Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03577 ATGCAGGATCCAACGTTATTCCAATCCATGAAACCCCACTTTCCCGAACAAGAGCAACTTAAATGTCCGCGTTGTGACTCCACCAACACCAAGTTTTGCTACTACAACAACTACAACCTCTCTCAGCCTCGCCATTTTTGCAAGAACTGCAGAAGGTATTGGACCAAAGGGGGGGCTTTGAGAAACATACCCGTTGGGGGTGGAAGCAGAAAGAATACAAAACGATCATCTTCAACCAACAACACCAAACGCGCTTCCTCTGCGCCCGATCCGACCCAGATTAATCCCACCCCCGTTGGTGCTGCTGGGAGTTTCACTTCCCTTTTGGCATCAACTGGCCTCACTTCAAGTGGCTCAAATCTAAAAACTCTGCAAATGGAAGAGTTTGCAGAGAATGTTAGTTCTGCTCCAAAGCTGGATCCCAACCCCGGTTTGGTGATGCAAAGCAATGGGAATGCAGACACTTTTCTGAGTTTGCAAAATGGTGATTCAACCTGTTGGAATGACACAAATGGCTGGTCCAATCTTGCAATATTCACTCCTGGGTCAAGCTTTCAGTGA 561 0.4724 MQDPTLFQSMKPHFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSTNNTKRASSAPDPTQINPTPVGAAGSFTSLLASTGLTSSGSNLKTLQMEEFAENVSSAPKLDPNPGLVMQSNGNADTFLSLQNGDSTCWNDTNGWSNLAIFTPGSSFQ 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03577 186 MobiDBLite consensus disorder prediction 61 100 - -
Pste3g03577 186 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Pste3g03577 186 MobiDBLite consensus disorder prediction 69 100 - -
Pste3g03577 186 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Pste3g03577 186 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Pste3g03577 186 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 135 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03577 Pste-Chr3 28111427 28111987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03577 11 111 C2C2-Dof Transcription Factor Family AT1G51700 60.630 1.51e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste3g03577 zf-Dof 1.8e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03577 3 28111427 28111987 Pste3g03577 3 28111427 28111987 ECH