Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03573 ATTTTCATAGGCATCGTGATTGGGGTGGGTTTGACATTGTCGATTGTGTTGTGTGTCATATGTGGAAGGAAACGCACAAAGATTGATAGGTGCAGTTCTTACAGCGCAGTCACCGTTCCTGTTCATTTCCAAGGGGTTGATACTAATACAATATCAGAGGGTCTGGAATCACCCAGAACATCTGAGTGGAGTAACACGCCTTTATGGTTGGAAAATCTTAGGAGGAAGGGTGCAGTGTCAGCATGTGGAATTCCCAAGTATTCTTACAAAGATGTTCAAAAAGCTACTTCTAATTTCACAACCATCATAGGCAATGGAGCATTTGGTCCTGTTTATAAAGCGCAAATGGATACAGGTGAGACGGTTGCAGTTAAAGTCCTTGGTACTAATTCAAGGCAAGGAGAACAGGAATTTTTAACTGAGGTTTTATTACTTGGAAGATTACATCACAAAAACCTTGTGGATTTGGTGGGTTATGTGGCAGAAAGTGGAAAGCATATGCTTCTTTACATTTATATGAGCAATGGCAGTCTTTCTTCCCATTTGTATGCTGATTTAGATAAAAATCACGAGCCATTGAGCTGGGATTTGAGGCTTAGCATAGCACTAGATGTTGCAAGGGGGCTGGAATATCTACATTTTGGGGCTTCTCCACCTGTTGTGCACCGTGACATCAAATCTGGCAATATACTGTTGGACCAATCTATGAGAGCCAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGACGAATCAACCTCGTACATCAAATATCAGAGGCACTTTCGGATATCTAGATCCAGAGTATTTGTCTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGTTTTGGGGTGCTATTGTTTGAGCTTATCACTGGCAGGAATCCACAGCAAGGGCTCATGGAATATGTGAAACTAGCAGCCATGGAAGGTCAGGGTAAGGTTGGATGGGAAGAAATTGTGGATGCACAATTAAACGGAAAATATGATGTGCATAATCTTAATGACCTGGCTTCACTTGCATTCAAATGTGTTAATGAAGTCTCCAAAAGCCGACCTCCCATGAGCGACATTGTTCCAGCATTATCTTGTATTTGTAAAAGGCATAATAAAAATCATGGCCAAACATCTCCTAATGCATCAAATGAAGTGTGCATTGAAGTGGACCAACTTGAAGCACCTGGCTTTTCATCTTTTGAGAGTTCACAGATGCTGTGCAGAATGCTTAGTCGATGATCTTTATGCGTTTGCTAGTGCTTTTGGATGTGTAAAATGTAAATAGCCTAGGGCTCTATTTTTTCACTTAGTGAACAGTGTAACTTCTTTATCACATTGGAATTATGAAATACATGATTGCATGCTTGATTAATAATTGTCAGTCTGCTACTGTCTTTGGA 1400 0.4057 IFIGIVIGVGLTLSIVLCVICGRKRTKIDRCSSYSAVTVPVHFQGVDTNTISEGLESPRTSEWSNTPLWLENLRRKGAVSACGIPKYSYKDVQKATSNFTTIIGNGAFGPVYKAQMDTGETVAVKVLGTNSRQGEQEFLTEVLLLGRLHHKNLVDLVGYVAESGKHMLLYIYMSNGSLSSHLYADLDKNHEPLSWDLRLSIALDVARGLEYLHFGASPPVVHRDIKSGNILLDQSMRAKVTDFGLSRPETNQPRTSNIRGTFGYLDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQQGLMEYVKLAAMEGQGKVGWEEIVDAQLNGKYDVHNLNDLASLAFKCVNEVSKSRPPMSDIVPALSCICKRHNKNHGQTSPNASNEVCIEVDQLEAPGFSSFESSQMLCRMLSR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03573 412 CDD STKc_IRAK 103 360 - -
Pste3g03573 412 PANTHER OS01G0750732 PROTEIN 12 378 - -
Pste3g03573 412 SUPERFAMILY Protein kinase-like (PK-like) 83 363 IPR011009 -
Pste3g03573 412 Gene3D Transferase(Phosphotransferase) domain 1 173 391 - -
Pste3g03573 412 Pfam Protein tyrosine and serine/threonine kinase 99 362 IPR001245 GO:0004672|GO:0006468
Pste3g03573 412 FunFam calcium/calmodulin-regulated receptor-like kinase 1 173 383 - -
Pste3g03573 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Pste3g03573 412 SMART serkin_6 97 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03573 412 Gene3D Phosphorylase Kinase; domain 1 70 172 - -
Pste3g03573 412 ProSiteProfiles Protein kinase domain profile. 97 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03573 Pste-Chr3 28095958 28099856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03573 56 388 Glycoside Hydrolase AT3G07070 40.741 1.54e-73 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pste3g03573 PK_Tyr_Ser-Thr 3.7e-49 CL0016