Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03554 ATGGAATCCTCCAATCAATTCCATGAATCATTTAGACAAGGTCTTACTGCTGGATATGTTTTTGCTGCAACATTTGTCATAGTCTTTTATATGTCCTATTGTCTACCGGCACAACTTGTCAAGAACAACAGCAAAAGTAAAATGAGTGGAAATAAGAAAACAACACAGAAACGTAGATTGCCATATCAGGAGTTGAAACAAGAAAAAAGCCAAGAGAAACAGAAGAGGGCCAGGCAGAGAGAGAAAGAGTTGCCTGCGGAGCTGATAGAGAGAAGGATACAGATAGATGAAATTGGATGGTTGACGTGTAGAACGAGCTTCACAGAACTCTGTGAAGCAACGCACCACTTCAGTGAGGGCAGTGCCATTGGTGAGGGAAGGACTGGGACAATGTACAAGGCAACACTTCCAAATGGATTGTGCCTGGCAGTTAAGAGACTTTATGATTCAGAGTTGTTTATGAGAAGGTTCAAGATAGAAAGAATGATGGGTAGGTACAGTCACAGAAACATAATTACCCCCATCAATTTCTGCGTAGAAAAAGAAAGAAATGAAAGAATTTTGGTGTATGATTACATGTCAAATGGAAGGCTTTCCGATTGGTTGAATGATACCACCACATTAGGATGGTCTGCAGTTATTAGGATTGCATTGGGAGTTGCAAGAGGATTATCATGCCTTCATCATAGCTTGCATATGGTCCATCTTAGTATTGGTCCCGATAGTATCTTGTTAGGAAACAATTTTGAGCCCAAAATATCCAATTTTGGAGGGGCCATATTCATAAGCTATGATCTAGGTTCTGGATTTGATAAGAAGGATGTATTCGACTTTGGAACTTTGCTTTTTGAGCTGATTAGGGGGAAGACATTTCACCAAACACGTAAATGTTTTAGCAATAGTAATGGTCCTTTTGAGACTTACACATATGCTACTAATATGCTCGAGGACCCTTCTGACTTCTACGATGCTGTGGATAAATCTCTAAAGGATATTGACTTTGAGGATGAGGTTTCTGCTTTGCTCAGAGTTGCATGTGACTGTGTTCATCCTTTTCCTTTTAAAAGGCCTACAATGCTTGAAGTGTACAGTAAGATGAGCAAAATATGGGACATAGATGGGAATTTTGAAGATTCTTTGATGTCCTAG 1149 0.3969 MESSNQFHESFRQGLTAGYVFAATFVIVFYMSYCLPAQLVKNNSKSKMSGNKKTTQKRRLPYQELKQEKSQEKQKRARQREKELPAELIERRIQIDEIGWLTCRTSFTELCEATHHFSEGSAIGEGRTGTMYKATLPNGLCLAVKRLYDSELFMRRFKIERMMGRYSHRNIITPINFCVEKERNERILVYDYMSNGRLSDWLNDTTTLGWSAVIRIALGVARGLSCLHHSLHMVHLSIGPDSILLGNNFEPKISNFGGAIFISYDLGSGFDKKDVFDFGTLLFELIRGKTFHQTRKCFSNSNGPFETYTYATNMLEDPSDFYDAVDKSLKDIDFEDEVSALLRVACDCVHPFPFKRPTMLEVYSKMSKIWDIDGNFEDSLMS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03554 382 Pfam Protein tyrosine and serine/threonine kinase 120 365 IPR001245 GO:0004672|GO:0006468
Pste3g03554 382 MobiDBLite consensus disorder prediction 44 82 - -
Pste3g03554 382 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 80 372 - -
Pste3g03554 382 Gene3D Transferase(Phosphotransferase) domain 1 193 267 - -
Pste3g03554 382 ProSiteProfiles Protein kinase domain profile. 117 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g03554 382 Gene3D Transferase(Phosphotransferase) domain 1 268 377 - -
Pste3g03554 382 MobiDBLite consensus disorder prediction 57 82 - -
Pste3g03554 382 Gene3D Phosphorylase Kinase; domain 1 41 192 - -
Pste3g03554 382 SUPERFAMILY Protein kinase-like (PK-like) 102 364 IPR011009 -
Pste3g03554 382 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03554 Pste-Chr3 27939594 27941268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03554 104 369 Receptor kinase-like Gene Family AT5G07280 32.881 6.01e-39 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste3g03554 PK_Tyr_Ser-Thr 2.7e-16 CL0016